RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MSH4O15457 936 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 NOP2P46087 812 aaKnown RBP17.29■□□□□ 0.36
BRD9-208ENST00000489816 PSMD2Q13200 908 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 RAD17O75943 681 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 GCFC2P16383 781 aaKnown RBP17.29■□□□□ 0.36
BRD9-208ENST00000489816 NMT1P30419 496 aaKnown RBP17.29■□□□□ 0.36
BRD9-208ENST00000489816 HOXD13P35453 343 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 KLHDC7AQ5VTJ3 777 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 WDR93Q6P2C0 686 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
BRD9-208ENST00000489816 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 TSGA10Q9BZW7 698 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 LRRC27Q9C0I9 530 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
BRD9-208ENST00000489816 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
BRD9-208ENST00000489816 AKAP3O75969 853 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 SYDE2Q5VT97 1194 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 NOX5Q96PH1 765 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 HPCAL4Q9UM19 191 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 SPATA31A6Q5VVP1 1343 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 OPLAHO14841 1288 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
BRD9-208ENST00000489816 BMP3P12645 472 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
BRD9-208ENST00000489816 SPIRE1Q08AE8 756 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
BRD9-208ENST00000489816 COG2Q14746 738 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 ETNPPLQ8TBG4 499 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 LENG9Q96B70 501 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 FBXO28Q9NVF7 368 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 KDM3AQ9Y4C1 1321 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 PTK2Q05397 1052 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 VEZTQ9HBM0 779 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 ARMCX3Q9UH62 379 aaPredicted RBP17.28■□□□□ 0.36
BRD9-208ENST00000489816 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
BRD9-208ENST00000489816 ZNF831Q5JPB2 1677 aa17.27■□□□□ 0.36
BRD9-208ENST00000489816 PDE6BP35913 854 aa17.27■□□□□ 0.36
BRD9-208ENST00000489816 ASTE1Q2TB18 679 aaPredicted RBP17.27■□□□□ 0.36
BRD9-208ENST00000489816 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
BRD9-208ENST00000489816 PPP1R18Q6NYC8 613 aa17.27■□□□□ 0.36
BRD9-208ENST00000489816 KLHL7Q8IXQ5 586 aa17.27■□□□□ 0.36
BRD9-208ENST00000489816 CEP72Q9P209 647 aa17.27■□□□□ 0.36
BRD9-208ENST00000489816 AJAP1Q9UKB5 411 aaPredicted RBP17.27■□□□□ 0.36
BRD9-208ENST00000489816 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
BRD9-208ENST00000489816 ANO9A1A5B4 782 aa17.27■□□□□ 0.35
BRD9-208ENST00000489816 USP11P51784 963 aa17.27■□□□□ 0.35
BRD9-208ENST00000489816 CDK17Q00537 523 aa17.27■□□□□ 0.35
BRD9-208ENST00000489816 SUGT1Q9Y2Z0 365 aa17.27■□□□□ 0.35
BRD9-208ENST00000489816 C21orf2O43822 256 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
BRD9-208ENST00000489816 PAFAH1B1P43034 410 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 GUCY2FP51841 1108 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 SEMA3FQ13275 785 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 COBLL1Q53SF7 1204 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 TXLNBQ8N3L3 684 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 ZBTB21Q9ULJ3 1066 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 HAUS3Q68CZ6 603 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 MYCT1Q8N699 235 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 EIF2AK1Q9BQI3 630 aaKnown RBP17.26■□□□□ 0.35
BRD9-208ENST00000489816 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
BRD9-208ENST00000489816 EHD4Q9H223 541 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 NYAP2Q9P242 653 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 SERPING1P05155 500 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 ASIC2Q16515 512 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
BRD9-208ENST00000489816 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 EXOC4Q96A65 974 aa17.26■□□□□ 0.35
BRD9-208ENST00000489816 UBR3Q6ZT12 1888 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
BRD9-208ENST00000489816 KCTD16Q68DU8 428 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 SLFN12Q8IYM2 578 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 DYDC2Q96IM9 177 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■■■■■ 32.6
BRD9-208ENST00000489816 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 LY75O60449 1722 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 H0YIN7 160 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 GLI1P08151 1106 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 XRCC5P13010 732 aaKnown RBP17.25■□□□□ 0.35
BRD9-208ENST00000489816 MAP9Q49MG5 647 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 C8orf74Q6P047 294 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 ZNF571Q7Z3V5 609 aaPredicted RBP17.25■□□□□ 0.35
BRD9-208ENST00000489816 KRT12Q99456 494 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 RABGAP1Q9Y3P9 1069 aa17.25■□□□□ 0.35
BRD9-208ENST00000489816 CYP2J2P51589 502 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 DGKZQ13574 1117 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 EXOC3L4Q17RC7 722 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 NFU1Q9UMS0 254 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 AGPSO00116 658 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 PPIP5K2O43314 1243 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 UCHL3P15374 230 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 RPA1P27694 616 aa17.24■□□□□ 0.35
BRD9-208ENST00000489816 CARSP49589 748 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms