RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 GABPB1Q06547 395 aaPredicted RBP17.1■□□□□ 0.33
PTK7-216ENST00000489707 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 SFR1Q86XK3 245 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 CYP2W1Q8TAV3 490 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 RPGRIP1Q96KN7 1286 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 NACC1Q96RE7 527 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 TEKT3Q9BXF9 490 aa17.1■□□□□ 0.33
PTK7-216ENST00000489707 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
PTK7-216ENST00000489707 PDGFDQ9GZP0 370 aaPredicted RBP17.1■□□□□ 0.33
PTK7-216ENST00000489707 TYW1Q9NV66 732 aaKnown RBP17.1■□□□□ 0.33
PTK7-216ENST00000489707 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 LRRC53A6NM62 1247 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 EIF3DO15371 548 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTK7-216ENST00000489707 PTGER2P43116 358 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 KIF11P52732 1056 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 CKAP4Q07065 602 aaKnown RBP17.09■□□□□ 0.33
PTK7-216ENST00000489707 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 TRIM58Q8NG06 486 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
PTK7-216ENST00000489707 RIT2Q99578 217 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 WDR18Q9BV38 432 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 ARMCX3Q9UH62 379 aaPredicted RBP17.09■□□□□ 0.33
PTK7-216ENST00000489707 PGAP2Q9UHJ9 254 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 UBE4BO95155 1302 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
PTK7-216ENST00000489707 SLC16A3O15427 465 aaKnown RBP17.09■□□□□ 0.33
PTK7-216ENST00000489707 FAM13AO94988 1023 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 BCRP11274 1271 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 HSD17B4P51659 736 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
PTK7-216ENST00000489707 BRD3Q15059 726 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 EPHA7Q15375 998 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 BAP1Q92560 729 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 ZNF341Q9BYN7 854 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 SAR1BQ9Y6B6 198 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 MYH11P35749 1972 aa17.09■□□□□ 0.33
PTK7-216ENST00000489707 CCDC151A5D8V7 595 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 EML1O00423 815 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.33
PTK7-216ENST00000489707 FDX1P10109 184 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 POLD1P28340 1107 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.33
PTK7-216ENST00000489707 AMPD2Q01433 879 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 RASA3Q14644 834 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 NBPF9Q3BBW0 867 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 SFMBT2Q5VUG0 894 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 TPH2Q8IWU9 490 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.33
PTK7-216ENST00000489707 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 KIAA1683Q9H0B3 1180 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 ARHGAP20Q9P2F6 1191 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 ODF2LQ9ULJ1 636 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 PCDHA13Q9Y5I0 950 aa17.08■□□□□ 0.33
PTK7-216ENST00000489707 TACC1O75410 805 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 ERLIN1O75477 346 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 SLITRK3O94933 977 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 ABL1P00519 1130 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 SERPING1P05155 500 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
PTK7-216ENST00000489707 XRCC5P13010 732 aaKnown RBP17.08■□□□□ 0.32
PTK7-216ENST00000489707 TAL1P17542 331 aaPredicted RBP17.08■□□□□ 0.32
PTK7-216ENST00000489707 EIF4A3P38919 411 aaKnown RBP17.08■□□□□ 0.32
PTK7-216ENST00000489707 GHRHRQ02643 423 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 PAPD7Q5XG87 772 aaKnown RBP17.08■□□□□ 0.32
PTK7-216ENST00000489707 IQCEQ6IPM2 695 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 ALS2CR12Q96Q35 445 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 MXRA8Q9BRK3 442 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 RGL1Q9NZL6 768 aa17.08■□□□□ 0.32
PTK7-216ENST00000489707 PUF60Q9UHX1 559 aaKnown RBP17.08■□□□□ 0.32
PTK7-216ENST00000489707 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
PTK7-216ENST00000489707 EPHB6O15197 1021 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 NKRFO15226 690 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■■□ 24.3
PTK7-216ENST00000489707 CTNND1O60716 968 aaKnown RBP17.07■□□□□ 0.32
PTK7-216ENST00000489707 GCNT3O95395 438 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 NFIL3Q16649 462 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
PTK7-216ENST00000489707 TBC1D5Q92609 795 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
PTK7-216ENST00000489707 PARD6BQ9BYG5 372 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 ZNF446Q9NWS9 450 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 FAM53CQ9NYF3 392 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 TRIM10Q9UDY6 481 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 FRMPD4Q14CM0 1322 aa17.07■□□□□ 0.32
PTK7-216ENST00000489707 SHTN1A0MZ66 631 aa17.06■□□□□ 0.32
PTK7-216ENST00000489707 PHF20L1A8MW92 1017 aa17.06■□□□□ 0.32
PTK7-216ENST00000489707 CHMP2AO43633 222 aa17.06■□□□□ 0.32
PTK7-216ENST00000489707 AFPP02771 609 aaKnown RBP17.06■□□□□ 0.32
PTK7-216ENST00000489707 USP14P54578 494 aa17.06■□□□□ 0.32
PTK7-216ENST00000489707 KCNH2Q12809 1159 aa17.06■□□□□ 0.32
PTK7-216ENST00000489707 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms