RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PCDHA10Q9Y5I2 948 aa15.82■□□□□ 0.12
VPS26A-205ENST00000489656 KLRC4O43908 158 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 FARP2O94887 1054 aaPredicted RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 RPN1P04843 607 aaKnown RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 XRCC6P12956 609 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 CASP1P29466 404 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 RGS2P41220 211 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 QARSP47897 775 aaKnown RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 CTTNQ14247 550 aaKnown RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 METTL7BQ6UX53 244 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 ABHD15Q6UXT9 468 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 FBXO16Q8IX29 292 aaPredicted RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 SYT2Q8N9I0 419 aaPredicted RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 NPLOC4Q8TAT6 608 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 FAM200AQ8TCP9 573 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 TINF2Q9BSI4 451 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 RBSNQ9H1K0 784 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 BLZF1Q9H2G9 400 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.81■□□□□ 0.12
VPS26A-205ENST00000489656 GJD2Q9UKL4 321 aa15.81■□□□□ 0.12
VPS26A-205ENST00000489656 KAT6AQ92794 2004 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.8■□□□□ 0.12
VPS26A-205ENST00000489656 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 MYMKA6NI61 221 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 BIN1O00499 593 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 DKC1O60832 514 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS26A-205ENST00000489656 SNAI1O95863 264 aaPredicted RBP15.8■□□□□ 0.12
VPS26A-205ENST00000489656 IGHA2P01877 340 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 PSAPP07602 524 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 VEGFBP49765 207 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 FCGRTP55899 365 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 ACTR2P61160 394 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 PSMC5P62195 406 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 PSMC6P62333 389 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 TTLL4Q14679 1199 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
VPS26A-205ENST00000489656 OLFML2BQ68BL8 750 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 CYFIP1Q7L576 1253 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 TPH2Q8IWU9 490 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 C4orf19Q8IY42 314 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 BANK1Q8NDB2 785 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 APBA2Q99767 749 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 BPIFA3Q9BQP9 254 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 NAT10Q9H0A0 1025 aaKnown RBP15.8■□□□□ 0.12
VPS26A-205ENST00000489656 DNAJC25Q9H1X3 360 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 WRAP73Q9P2S5 460 aaPredicted RBP15.8■□□□□ 0.12
VPS26A-205ENST00000489656 SAMM50Q9Y512 469 aa15.8■□□□□ 0.12
VPS26A-205ENST00000489656 IGSF9BQ9UPX0 1349 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 IGKV6D-21A0A0A0MT36 114 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 TNPO2O14787 897 aaKnown RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 RHOBTB3O94955 611 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 ARIH2O95376 493 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 GGPS1O95749 300 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 SUPT20HL2P0C7V6 817 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 CYP11B2P19099 503 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 BMP6P22004 513 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 CTGFP29279 349 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 MRE11P49959 708 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 LACTBP83111 547 aaPredicted RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 DPCR1Q3MIW9 517 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 CELF3Q5SZQ8 465 aaKnown RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 MIS18BP1Q6P0N0 1132 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 C11orf57Q6ZUT1 292 aaPredicted RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 EEPD1Q7L9B9 569 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 MLKLQ8NB16 471 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 CCDC47Q96A33 483 aaKnown RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 DNAJC19Q96DA6 116 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 BCAS3Q9H6U6 928 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 BMP2KQ9NSY1 1161 aaPredicted RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 KCND2Q9NZV8 630 aa15.79■□□□□ 0.12
VPS26A-205ENST00000489656 DBR1Q9UK59 544 aaKnown RBP15.79■□□□□ 0.12
VPS26A-205ENST00000489656 ZNF165P49910 485 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 ASIC1P78348 528 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 DHX8Q14562 1220 aaKnown RBP15.78■□□□□ 0.12
VPS26A-205ENST00000489656 UVSSAQ2YD98 709 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
VPS26A-205ENST00000489656 UNC13DQ70J99 1090 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 GPBP1Q86WP2 473 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 DDX12PQ92771 950 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 ATP6V0A1Q93050 837 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 BHMT2Q9H2M3 363 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 ANKEF1Q9NU02 776 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 RNF186Q9NXI6 227 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 DACH1Q9UI36 760 aa15.78■□□□□ 0.12
VPS26A-205ENST00000489656 A0A087WWV3 80 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 GSTTP1A0A1W2PQM5 241 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 FRMD3A2A2Y4 597 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 TXNP10599 105 aaKnown RBP15.77■□□□□ 0.12
VPS26A-205ENST00000489656 XRCC5P13010 732 aaKnown RBP15.77■□□□□ 0.12
VPS26A-205ENST00000489656 SP3Q02447 781 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 EHHADHQ08426 723 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 UGCGQ16739 394 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 LY6KQ17RY6 165 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 KMT5BQ4FZB7 885 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 COBLL1Q53SF7 1204 aa15.77■□□□□ 0.12
VPS26A-205ENST00000489656 ARSHQ5FYA8 562 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms