RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 SUPT16HQ9Y5B9 1047 aaKnown RBP11.92□□□□□ -0.5
CHKB-211ENST00000489453 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
CHKB-211ENST00000489453 CDY2AQ9Y6F7 541 aa11.92□□□□□ -0.5
CHKB-211ENST00000489453 TAF6LQ9Y6J9 622 aa11.92□□□□□ -0.5
CHKB-211ENST00000489453 RRN3P2A6NIE6 340 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 C5orf67F2Z3F1 127 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 MEIS2O14770 477 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 SGSM2O43147 1006 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 KCNA2P16389 499 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 MCM5P33992 734 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
CHKB-211ENST00000489453 MGAT3Q09327 533 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 IER5Q5VY09 327 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 FAM49AQ9H0Q0 323 aaPredicted RBP11.91□□□□□ -0.5
CHKB-211ENST00000489453 IGFLR1Q9H665 355 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
CHKB-211ENST00000489453 ENPP3O14638 875 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 GRM6O15303 877 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 ATP9AO75110 1047 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 RXRAP19793 462 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 ZP2Q05996 745 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 UBE2SQ16763 222 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 FNDC1Q4ZHG4 1894 aaPredicted RBP11.9□□□□□ -0.5
CHKB-211ENST00000489453 FBXO47Q5MNV8 452 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 ADHFE1Q8IWW8 467 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
CHKB-211ENST00000489453 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 PLVAPQ9BX97 442 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 FTHL17Q9BXU8 183 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 PLXNA4Q9HCM2 1894 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 JPH1Q9HDC5 661 aaPredicted RBP11.9□□□□□ -0.5
CHKB-211ENST00000489453 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 TRPV2Q9Y5S1 764 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 SLC12A7Q9Y666 1083 aa11.9□□□□□ -0.5
CHKB-211ENST00000489453 GSTTP1A0A1W2PQM5 241 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
CHKB-211ENST00000489453 MAFGO15525 162 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 MMP1P03956 469 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 STAG3L1P0CL83 205 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 ITGB5P18084 799 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 IBSPP21815 317 aaPredicted RBP11.89□□□□□ -0.51
CHKB-211ENST00000489453 CD52P31358 61 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 NDUFV1P49821 464 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 HYAL1Q12794 435 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 PAK2Q13177 524 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 NPAS4Q8IUM7 802 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 CMTR1Q8N1G2 835 aaKnown RBP11.89□□□□□ -0.51
CHKB-211ENST00000489453 CCDC82Q8N4S0 544 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 MAP4K1Q92918 833 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
CHKB-211ENST00000489453 JADE2Q9NQC1 790 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 SLC9A2Q9UBY0 812 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 CD207Q9UJ71 328 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 PCDHA6Q9UN73 950 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 PCDHA8Q9Y5H6 950 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 UBIAD1Q9Y5Z9 338 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 WDR81Q562E7 1941 aa11.89□□□□□ -0.51
CHKB-211ENST00000489453 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
CHKB-211ENST00000489453 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
CHKB-211ENST00000489453 MBLAC1A4D2B0 266 aaPredicted RBP11.88□□□□□ -0.51
CHKB-211ENST00000489453 DGKIO75912 1065 aa11.88□□□□□ -0.51
CHKB-211ENST00000489453 INSRRP14616 1297 aa11.88□□□□□ -0.51
CHKB-211ENST00000489453 TMEM62Q0P6H9 643 aa11.88□□□□□ -0.51
CHKB-211ENST00000489453 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
CHKB-211ENST00000489453 PAN2Q504Q3 1202 aaKnown RBP11.88□□□□□ -0.51
CHKB-211ENST00000489453 SPOUT1Q5T280 376 aaKnown RBP11.88□□□□□ -0.51
CHKB-211ENST00000489453 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
CHKB-211ENST00000489453 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
CHKB-211ENST00000489453 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
CHKB-211ENST00000489453 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 STXBP3O00186 592 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 MBTPS2O43462 519 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 ZNF76P36508 570 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 LTBRP36941 435 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 LIFRP42702 1097 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 NAPAP54920 295 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 SMAD2Q15796 467 aaKnown RBP11.87□□□□□ -0.51
CHKB-211ENST00000489453 NAALADL2Q58DX5 795 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 MARCH8Q5T0T0 291 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 TMTC3Q6ZXV5 915 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 ALYREFQ86V81 257 aaKnown RBP11.87□□□□□ -0.51
CHKB-211ENST00000489453 P2RX5Q93086 422 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 ZNF689Q96CS4 500 aaPredicted RBP11.87□□□□□ -0.51
CHKB-211ENST00000489453 ZBTB10Q96DT7 871 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 RC3H2Q9HBD1 1191 aaKnown RBP11.87□□□□□ -0.51
CHKB-211ENST00000489453 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
CHKB-211ENST00000489453 MRPL42Q9Y6G3 142 aaKnown RBP11.87□□□□□ -0.51
CHKB-211ENST00000489453 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
CHKB-211ENST00000489453 SCG2P13521 617 aa11.86□□□□□ -0.51
CHKB-211ENST00000489453 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHKB-211ENST00000489453 IRS1P35568 1242 aa11.86□□□□□ -0.51
CHKB-211ENST00000489453 STAT5BP51692 787 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms