RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
VTI1A-207ENST00000489357 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 LARP4BQ92615 738 aaKnown RBP9.43□□□□□ -0.9
VTI1A-207ENST00000489357 PTPN18Q99952 460 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 WDR18Q9BV38 432 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 NUP58Q9BVL2 599 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 L2HGDHQ9H9P8 463 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 MAGEC2Q9UBF1 373 aaPredicted RBP9.43□□□□□ -0.9
VTI1A-207ENST00000489357 BIN2Q9UBW5 565 aaPredicted RBP9.43□□□□□ -0.9
VTI1A-207ENST00000489357 DDX25Q9UHL0 483 aaKnown RBP9.43□□□□□ -0.9
VTI1A-207ENST00000489357 RABGAP1Q9Y3P9 1069 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 CSADQ9Y600 493 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 MANSC4A6NHS7 340 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-207ENST00000489357 LGALS16A8MUM7 142 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 TMEM232C9JQI7 657 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 F5H6K3 240 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 N4BP3O15049 544 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 CCDC175P0C221 793 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 TECP42680 631 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 COPB1P53618 953 aaKnown RBP9.42□□□□□ -0.9
VTI1A-207ENST00000489357 KLRC3Q07444 240 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 KRT31Q15323 416 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 CDC37Q16543 378 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-207ENST00000489357 QRICH1Q2TAL8 776 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 TMEM119Q4V9L6 283 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 FIGNQ5HY92 759 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 HAUS3Q68CZ6 603 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 KLHL10Q6JEL2 608 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 GUF1Q8N442 669 aaKnown RBP9.42□□□□□ -0.9
VTI1A-207ENST00000489357 PDCL2Q8N4E4 241 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 P2RX5Q93086 422 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 COA7Q96BR5 231 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 ERO1AQ96HE7 468 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 FAM20AQ96MK3 541 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 MMTAG2Q9BU76 263 aaKnown RBP9.42□□□□□ -0.9
VTI1A-207ENST00000489357 BLZF1Q9H2G9 400 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 KCNMB3Q9NPA1 279 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 PRDM10Q9NQV6 1147 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 MYO1AQ9UBC5 1043 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 PNMA2Q9UL42 364 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 PCDHA12Q9UN75 941 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 PCDHA1Q9Y5I3 950 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 CASP8AP2Q9UKL3 1982 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
VTI1A-207ENST00000489357 DOCK3Q8IZD9 2030 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 A0A0G2JLL6 359 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-207ENST00000489357 USP27XA6NNY8 438 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 CFAP99D6REC4 459 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 PPP1R11O60927 126 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-207ENST00000489357 ASNSP08243 561 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 CYP3A4P08684 503 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 BMP3P12645 472 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 MUTP22033 750 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 CIITAP33076 1130 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 SREBF1P36956 1147 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 TXKP42681 527 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 GTF2A2P52657 109 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 ASIC1P78348 528 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 GRB10Q13322 594 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 HSP90AA2PQ14568 343 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-207ENST00000489357 SHROOM1Q2M3G4 852 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-207ENST00000489357 Q4G0T1 1027 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 CENPPQ6IPU0 288 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 PRRT2Q7Z6L0 340 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-207ENST00000489357 FBXO11Q86XK2 927 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 SIAH1Q8IUQ4 282 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 SAMD3Q8N6K7 520 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 ERMNQ8TAM6 284 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 BRI3BPQ8WY22 251 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 ANKRD7Q92527 254 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 RAD54LQ92698 747 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 SLC6A16Q9GZN6 736 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 CPVLQ9H3G5 476 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 EHMT1Q9H9B1 1298 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 ZCCHC17Q9NP64 241 aaKnown RBP9.41□□□□□ -0.9
VTI1A-207ENST00000489357 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 PPP2R2CQ9Y2T4 447 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 TMX2Q9Y320 296 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 RLFQ13129 1914 aa9.41□□□□□ -0.9
VTI1A-207ENST00000489357 A0A1W2PQJ5 194 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 PP2D1A8MPX8 630 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 IGF2BP3O00425 579 aaKnown RBP eCLIP9.4□□□□□ -0.9
VTI1A-207ENST00000489357 SLU7O95391 586 aaKnown RBP9.4□□□□□ -0.9
VTI1A-207ENST00000489357 NDUFB10O96000 172 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 STAT2P52630 851 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 EHHADHQ08426 723 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 SREBF2Q12772 1141 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 SYDE2Q5VT97 1194 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 CYP26C1Q6V0L0 522 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 ZNF662Q6ZS27 426 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms