RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 AK2P54819 239 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 NONOQ15233 471 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC6-232ENST00000489053 NTRK3Q16288 839 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 IER5Q5VY09 327 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 PDXDC2PQ6P474 469 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 PLPPR4Q7Z2D5 763 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 KRT25Q7Z3Z0 450 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 HERC6Q8IVU3 1022 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 SMAP1Q8IYB5 467 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-232ENST00000489053 BLIDQ8IZY5 108 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 UIMC1Q96RL1 719 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 FAM49AQ9H0Q0 323 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-232ENST00000489053 TTYH1Q9H313 450 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-232ENST00000489053 ZNF302Q9NR11 478 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 CHMP2AO43633 222 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 GTPBP6O43824 516 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 PFKFB2O60825 505 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 CA3P07451 260 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 INSRRP14616 1297 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 USP11P51784 963 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 WDR5P61964 334 aaKnown RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 SCRN1Q12765 414 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 ITGB3BPQ13352 177 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 GRIN2CQ14957 1233 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 LRCH2Q5VUJ6 765 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 ZNF746Q6NUN9 644 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 SWSAP1Q6NVH7 229 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 FAM117BQ6P1L5 589 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 TRMT1LQ7Z2T5 733 aaKnown RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 TBCKQ8TEA7 893 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 APBB2Q92870 758 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 TEKT3Q9BXF9 490 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 PRDM12Q9H4Q4 367 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 ORC3Q9UBD5 711 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-232ENST00000489053 TPCN1Q9ULQ1 816 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 CHD9Q3L8U1 2897 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 COL6A3P12111 3177 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
HDAC6-232ENST00000489053 WDR64B1ANS9 1081 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 HBP1O60381 514 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 NBNO60934 754 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 CXCL10P02778 98 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 JAK3P52333 1124 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 PLCB4Q15147 1175 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 TRIM71Q2Q1W2 868 aaKnown RBP10.32□□□□□ -0.76
HDAC6-232ENST00000489053 MYOCDQ8IZQ8 938 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 DBF4BQ8NFT6 615 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 DNAJB3Q8WWF6 145 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 PPM1EQ8WY54 764 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 WNT8BQ93098 351 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 FAM167AQ96KS9 214 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 CTAGE1Q96RT6 745 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 NAP1L4Q99733 375 aaKnown RBP10.32□□□□□ -0.76
HDAC6-232ENST00000489053 IFIH1Q9BYX4 1025 aaKnown RBP10.32□□□□□ -0.76
HDAC6-232ENST00000489053 CEP131Q9UPN4 1083 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 YBX2Q9Y2T7 364 aaKnown RBP10.32□□□□□ -0.76
HDAC6-232ENST00000489053 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 PCDHA10Q9Y5I2 948 aa10.32□□□□□ -0.76
HDAC6-232ENST00000489053 GHRP10912 638 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 MYOGP15173 224 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 HOXC8P31273 242 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 SFNP31947 248 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 CIITAP33076 1130 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 KRT2P35908 639 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 MRPS6P82932 125 aaKnown RBP10.31□□□□□ -0.76
HDAC6-232ENST00000489053 GNL2Q13823 731 aaKnown RBP10.31□□□□□ -0.76
HDAC6-232ENST00000489053 HIC1Q14526 733 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 SAFBQ15424 915 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC6-232ENST00000489053 LETM2Q2VYF4 491 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 ZNF484Q5JVG2 852 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 ABHD15Q6UXT9 468 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 RUFY4Q6ZNE9 571 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 METTL13Q8N6R0 699 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 NECAB1Q8N987 351 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 ARNTL2Q8WYA1 636 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 GTF3C6Q969F1 213 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 SCLT1Q96NL6 688 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 YME1L1Q96TA2 773 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 RIT2Q99578 217 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 RAD9AQ99638 391 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 CERS4Q9HA82 394 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 NRBP2Q9NSY0 501 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 DDX25Q9UHL0 483 aaKnown RBP10.31□□□□□ -0.76
HDAC6-232ENST00000489053 KCNJ14Q9UNX9 436 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 GINS2Q9Y248 185 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 CUL9Q8IWT3 2517 aa10.31□□□□□ -0.76
HDAC6-232ENST00000489053 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
HDAC6-232ENST00000489053 MSH4O15457 936 aa10.3□□□□□ -0.76
HDAC6-232ENST00000489053 CCNT1O60563 726 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms