RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CCDC85BQ15834 202 aaPredicted RBP26.21■■□□□ 1.79
COL9A3-213ENST00000489045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.21■■□□□ 1.79
COL9A3-213ENST00000489045 CRYGNQ8WXF5 182 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 COL25A1Q9BXS0 654 aaPredicted RBP26.21■■□□□ 1.79
COL9A3-213ENST00000489045 AZI2Q9H6S1 392 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 TUBE1Q9UJT0 475 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 EPOPA6NHQ4 379 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 GNA11P29992 359 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 FAM26DQ5JW98 314 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 FAM117BQ6P1L5 589 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 TAF2Q6P1X5 1199 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 SPRED2Q7Z698 418 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 PLA2G4DQ86XP0 818 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 ARNTL2Q8WYA1 636 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 SEPT8Q92599 483 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 UPF3BQ9BZI7 483 aaKnown RBP26.2■■□□□ 1.78
COL9A3-213ENST00000489045 TM6SF1Q9BZW5 370 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 PRDM6Q9NQX0 595 aa26.2■■□□□ 1.78
COL9A3-213ENST00000489045 DDX39AO00148 427 aaKnown RBP26.19■■□□□ 1.78
COL9A3-213ENST00000489045 CYP3A4P08684 503 aa26.19■■□□□ 1.78
COL9A3-213ENST00000489045 IGBP1P78318 339 aa26.19■■□□□ 1.78
COL9A3-213ENST00000489045 MARCH8Q5T0T0 291 aa26.19■■□□□ 1.78
COL9A3-213ENST00000489045 MCTP2Q6DN12 878 aa26.19■■□□□ 1.78
COL9A3-213ENST00000489045 VPS54Q9P1Q0 977 aa26.19■■□□□ 1.78
COL9A3-213ENST00000489045 PRRC2BQ5JSZ5 2229 aaKnown RBP26.19■■□□□ 1.78
COL9A3-213ENST00000489045 LOXHD1Q8IVV2 1947 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 IGLV3-22A0A075B6J6 115 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 MBLAC1A4D2B0 266 aaPredicted RBP26.18■■□□□ 1.78
COL9A3-213ENST00000489045 AMHP03971 560 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 INSRRP14616 1297 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 RPAINQ86UA6 219 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 MYOCDQ8IZQ8 938 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 MICALL1Q8N3F8 863 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 CCDC148Q8NFR7 591 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 RASGRP4Q8TDF6 673 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 RAD9AQ99638 391 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 LARP6Q9BRS8 491 aaKnown RBP26.18■■□□□ 1.78
COL9A3-213ENST00000489045 TRPC6Q9Y210 931 aa26.18■■□□□ 1.78
COL9A3-213ENST00000489045 MYH9P35579 1960 aaKnown RBP26.17■■□□□ 1.78
COL9A3-213ENST00000489045 CCNE2O96020 404 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 CHRNA1P02708 482 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 STAT5BP51692 787 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 PLCB4Q15147 1175 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 PLPPR4Q7Z2D5 763 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 RSPH3Q86UC2 560 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 BICD2Q8TD16 824 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 ZBTB10Q96DT7 871 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 REV3LO60673 3130 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 WDR81Q562E7 1941 aa26.17■■□□□ 1.78
COL9A3-213ENST00000489045 VCANP13611 3396 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 RRN3P2A6NIE6 340 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 ATG7O95352 703 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 MGAT3Q09327 533 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 ERICH6BQ5W0A0 696 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 DNAJB3Q8WWF6 145 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 ZNF274Q96GC6 653 aaPredicted RBP26.16■■□□□ 1.78
COL9A3-213ENST00000489045 UIMC1Q96RL1 719 aa26.16■■□□□ 1.78
COL9A3-213ENST00000489045 IFIH1Q9BYX4 1025 aaKnown RBP26.16■■□□□ 1.78
COL9A3-213ENST00000489045 IPO5O00410 1097 aaKnown RBP26.15■■□□□ 1.78
COL9A3-213ENST00000489045 TRIM22Q8IYM9 498 aa26.15■■□□□ 1.78
COL9A3-213ENST00000489045 APBB2Q92870 758 aa26.15■■□□□ 1.78
COL9A3-213ENST00000489045 SH3GLB2Q9NR46 395 aa26.15■■□□□ 1.78
COL9A3-213ENST00000489045 MTCH2Q9Y6C9 303 aa26.15■■□□□ 1.78
COL9A3-213ENST00000489045 IGKV6D-21A0A0A0MT36 114 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 LINC01553A4QN01 128 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 DHX15O43143 795 aaKnown RBP26.14■■□□□ 1.78
COL9A3-213ENST00000489045 GTPBP6O43824 516 aaPredicted RBP26.14■■□□□ 1.78
COL9A3-213ENST00000489045 GHRP10912 638 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 SETQ01105 290 aaPredicted RBP26.14■■□□□ 1.78
COL9A3-213ENST00000489045 SSRP1Q08945 709 aaKnown RBP26.14■■□□□ 1.78
COL9A3-213ENST00000489045 STK3Q13188 491 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 ABHD15Q6UXT9 468 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 TRAPPC12Q8WVT3 735 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 TNPO1Q92973 898 aaKnown RBP26.14■■□□□ 1.78
COL9A3-213ENST00000489045 ZNF577Q9BSK1 485 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 PDRG1Q9NUG6 133 aa26.14■■□□□ 1.78
COL9A3-213ENST00000489045 NLRC5Q86WI3 1866 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.13■■□□□ 1.77
COL9A3-213ENST00000489045 POTEB3A0JP26 581 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 CPLX1O14810 134 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 BACH1O14867 736 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 POU3F3P20264 500 aaPredicted RBP26.13■■□□□ 1.77
COL9A3-213ENST00000489045 KRT40Q6A162 431 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 POTEBQ6S5H4 581 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 CCDC60Q8IWA6 550 aaPredicted RBP26.13■■□□□ 1.77
COL9A3-213ENST00000489045 FAM49AQ9H0Q0 323 aaPredicted RBP26.13■■□□□ 1.77
COL9A3-213ENST00000489045 THEGQ9P2T0 379 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 MTUS1Q9ULD2 1270 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 INSL6Q9Y581 213 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 CDY2AQ9Y6F7 541 aa26.13■■□□□ 1.77
COL9A3-213ENST00000489045 SLC26A2P50443 739 aa26.12■■□□□ 1.77
COL9A3-213ENST00000489045 NLRP5P59047 1200 aa26.12■■□□□ 1.77
COL9A3-213ENST00000489045 MRPS6P82932 125 aaKnown RBP26.12■■□□□ 1.77
COL9A3-213ENST00000489045 HTRA4P83105 476 aaPredicted RBP26.12■■□□□ 1.77
COL9A3-213ENST00000489045 GRB10Q13322 594 aa26.12■■□□□ 1.77
COL9A3-213ENST00000489045 LPIN1Q14693 890 aa26.12■■□□□ 1.77
COL9A3-213ENST00000489045 PRR16Q569H4 304 aa26.12■■□□□ 1.77
COL9A3-213ENST00000489045 FAM160B1Q5W0V3 765 aa26.12■■□□□ 1.77
COL9A3-213ENST00000489045 TGS1Q96RS0 853 aaKnown RBP26.12■■□□□ 1.77
COL9A3-213ENST00000489045 EVPLQ92817 2033 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms