RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 FGF18O76093 207 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 ZFYP08048 801 aaPredicted RBP14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 PDHBP11177 359 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 TOP1P11387 765 aaKnown RBP14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 UBA1P22314 1058 aaKnown RBP14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 MTHFRP42898 656 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 USH1GQ495M9 461 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 PAN2Q504Q3 1202 aaKnown RBP14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 FBXO47Q5MNV8 452 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 ARHGEF16Q5VV41 709 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 TAF2Q6P1X5 1199 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 TSHZ1Q6ZSZ6 1077 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 MCF2L2Q86YR7 1114 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 KBTBD3Q8NAB2 608 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 LMBR1Q8WVP7 490 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 CASP10Q92851 521 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 COL26A1Q96A83 441 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 PXMP2Q9NR77 195 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 AAASQ9NRG9 546 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 LIMD1Q9UGP4 676 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 CDH22Q9UJ99 828 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 ZZEF1O43149 2961 aa14.65□□□□□ -0.06
HLA-DPB1-216ENST00000488575 CACNA1IQ9P0X4 2223 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 EIF2AK2P19525 551 aaKnown RBP14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ZNF543Q08ER8 600 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 BORCS6Q96GS4 357 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 NAPBQ9H115 298 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ERVK-5Q9HDB9 667 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 DUSP12Q9UNI6 340 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 NRCAMQ92823 1304 aa14.64□□□□□ -0.07
HLA-DPB1-216ENST00000488575 PRR5-ARHGAP8B1AHC4 643 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RNF113AO15541 343 aaKnown RBP14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RAB11FIP3O75154 756 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ARHGAP8P85298 464 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SP2Q02086 613 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RTN4RL1Q86UN2 441 aaPredicted RBP14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 FTSJ3Q8IY81 847 aaKnown RBP14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RTKNQ9BST9 563 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 TMEM260Q9NX78 707 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SQORQ9Y6N5 450 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SPEGQ15772 3267 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 FRYQ5TBA9 3013 aa14.63□□□□□ -0.07
HLA-DPB1-216ENST00000488575 M0R2C6 588 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SCG2P13521 617 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ARHGAP4P98171 946 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 GHRHRQ02643 423 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 TDGQ13569 410 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 KIAA1841Q6NSI8 718 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 LLGL2Q6P1M3 1020 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RSPH3Q86UC2 560 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SIX5Q8N196 739 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 AGO3Q9H9G7 860 aaKnown RBP14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 MLXIPQ9HAP2 919 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 CYP26B1Q9NR63 512 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ZNF215Q9UL58 517 aaPredicted RBP14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 HCFC2Q9Y5Z7 792 aa14.62□□□□□ -0.07
HLA-DPB1-216ENST00000488575 DOCK5Q9H7D0 1870 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ORC4O43929 436 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SORBS3O60504 671 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 EOMESO95936 686 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RPLP2P05387 115 aaKnown RBP14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 SP9P0CG40 484 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 PLCB3Q01970 1234 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 LMNB2Q03252 620 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 GPATCH4Q5T3I0 446 aaKnown RBP14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 PLPP4Q5VZY2 271 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 FAM43BQ6ZT52 329 aaPredicted RBP14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 THNSL1Q8IYQ7 743 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 TCF25Q9BQ70 676 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 PDCD2LQ9BRP1 358 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RALYQ9UKM9 306 aaKnown RBP14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 FBXL21Q9UKT6 434 aa14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 CDV3Q9UKY7 258 aaKnown RBP14.61□□□□□ -0.07
HLA-DPB1-216ENST00000488575 HIDE1A8MVS5 230 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 NOP56O00567 594 aaKnown RBP14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 FGRP09769 529 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 CD52P31358 61 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 GATMP50440 423 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 TBC1D8BQ0IIM8 1120 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RUFY4Q6ZNE9 571 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 VSIG10LQ86VR7 867 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 COLGALT1Q8NBJ5 622 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RIN2Q8WYP3 895 aaPredicted RBP14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 MRPS27Q92552 414 aaKnown RBP14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 CHAMP1Q96JM3 812 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 TCP11L1Q9NUJ3 509 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 WNT16Q9UBV4 365 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 ANAPC4Q9UJX5 808 aa14.6□□□□□ -0.07
HLA-DPB1-216ENST00000488575 RLBP1P12271 317 aa14.59□□□□□ -0.07
HLA-DPB1-216ENST00000488575 HSD17B4P51659 736 aa14.59□□□□□ -0.07
HLA-DPB1-216ENST00000488575 CDC37Q16543 378 aaPredicted RBP14.59□□□□□ -0.07
HLA-DPB1-216ENST00000488575 VARS2Q5ST30 1063 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms