RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	BRF1	Q92994	677 aa		12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	CDHR1	Q96JP9	859 aa		12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	JAKMIP1	Q96N16	626 aa	Known RBP	12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	TGS1	Q96RS0	853 aa	Known RBP	12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	EHMT1	Q9H9B1	1298 aa		12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	AGO4	Q9HCK5	861 aa	Known RBP	12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	JPH1	Q9HDC5	661 aa	Predicted RBP	12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	ERAP1	Q9NZ08	941 aa		12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	TUBE1	Q9UJT0	475 aa		12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.84	□□□□□ -0.35
PCYT1A-215	ENST00000488235	TNFRSF10A	O00220	468 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CAND2	O75155	1236 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	AMH	P03971	560 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	INSRR	P14616	1297 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	SREBF1	P36956	1147 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ACTR2	P61160	394 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	KRT32	Q14532	448 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PKN1	Q16512	942 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PFKFB3	Q16875	520 aa	Predicted RBP	12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CEP55	Q53EZ4	464 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	JAKMIP3	Q5VZ66	844 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	RPAIN	Q86UA6	219 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CRYGN	Q8WXF5	182 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	LINC01599	Q8WXQ3	324 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	TOP1MT	Q969P6	601 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	UHRF1	Q96T88	793 aa	Predicted RBP	12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	IFIH1	Q9BYX4	1025 aa	Known RBP	12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	SMARCAD1	Q9H4L7	1026 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	AGO3	Q9H9G7	860 aa	Known RBP	12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	SLC9A2	Q9UBY0	812 aa		12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	TCF20	Q9UGU0	1960 aa	Known RBP	12.83	□□□□□ -0.36
PCYT1A-215	ENST00000488235	IGLV3-22	A0A075B6J6	115 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	MEIS1	O00470	390 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	MAFG	O15525	162 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	EDIL3	O43854	480 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	LINC00271	P0C7V0	271 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	METAP2	P50579	478 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PLCB4	Q15147	1175 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	NTRK3	Q16288	839 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PPP4R3CP	Q6ZMV5	832 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PHKB	Q93100	1093 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	AGXT2	Q9BYV1	514 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	INSL6	Q9Y581	213 aa		12.82	□□□□□ -0.36
PCYT1A-215	ENST00000488235	NID2	Q14112	1375 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	COL4A6	Q14031	1691 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	DDX39A	O00148	427 aa	Known RBP	12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	DHX15	O43143	795 aa	Known RBP	12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	HMGB1	P09429	215 aa	Known RBP	12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	SCG2	P13521	617 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	RPS6KB1	P23443	525 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	RCAN1	P53805	252 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	TMEM62	Q0P6H9	643 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	EPC2	Q52LR7	807 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	FBXO47	Q5MNV8	452 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	TAF2	Q6P1X5	1199 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	RASGRP4	Q8TDF6	673 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CCDC136	Q96JN2	1154 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	NCOA5	Q9HCD5	579 aa	Known RBP	12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CDY2A	Q9Y6F7	541 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	NFASC	O94856	1347 aa		12.81	□□□□□ -0.36
PCYT1A-215	ENST00000488235	MYO7A	Q13402	2215 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	IGKV6D-21	A0A0A0MT36	114 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ATG7	O95352	703 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	FOS	P01100	380 aa	Predicted RBP	12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	FGD1	P98174	961 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	AP3B2	Q13367	1082 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	BLOC1S2	Q6QNY1	142 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	FBXO22	Q8NEZ5	403 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	YME1L1	Q96TA2	773 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	SDF4	Q9BRK5	362 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	LARP6	Q9BRS8	491 aa	Known RBP	12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ZMYND12	Q9H0C1	365 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	RC3H2	Q9HBD1	1191 aa	Known RBP	12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	TRPC6	Q9Y210	931 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	WDFY4	Q6ZS81	3184 aa		12.8	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ZBTB42	B2RXF5	422 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	hCG_1984214	I3L0E3	225 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ENPP3	O14638	875 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ATP4A	P20648	1035 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	CD52	P31358	61 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	STAT5B	P51692	787 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	MRPS6	P82932	125 aa	Known RBP	12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ABHD15	Q6UXT9	468 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PLPPR4	Q7Z2D5	763 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PLA2G4D	Q86XP0	818 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	FBXL16	Q8N461	479 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ZNF713	Q8N859	430 aa	Predicted RBP	12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	APBB2	Q92870	758 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	HLA-C	Q95604	372 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	LMCD1	Q9NZU5	365 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	KAT6A	Q92794	2004 aa		12.79	□□□□□ -0.36
PCYT1A-215	ENST00000488235	ESYT2	A0FGR8	921 aa		12.78	□□□□□ -0.36
PCYT1A-215	ENST00000488235	POTEB3	A0JP26	581 aa		12.78	□□□□□ -0.36
PCYT1A-215	ENST00000488235	IPO5	O00410	1097 aa	Known RBP	12.78	□□□□□ -0.36
PCYT1A-215	ENST00000488235	PRPF3	O43395	683 aa	Known RBP	12.78	□□□□□ -0.36
PCYT1A-215	ENST00000488235	DTNB	O60941	627 aa		12.78	□□□□□ -0.36

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