RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 ASB2Q96Q27 587 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 SDF4Q9BRK5 362 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 AGXT2Q9BYV1 514 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 AGO4Q9HCK5 861 aaKnown RBP14.03□□□□□ -0.16
SDC3-204ENST00000487984 TUBE1Q9UJT0 475 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 MTUS1Q9ULD2 1270 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 NFASCO94856 1347 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 PRRC2BQ5JSZ5 2229 aaKnown RBP14.02□□□□□ -0.16
SDC3-204ENST00000487984 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.02□□□□□ -0.17
SDC3-204ENST00000487984 ESYT2A0FGR8 921 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 ADAMTS3O15072 1205 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 PSMA5P28066 241 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 ERVK-21P61565 698 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 IGBP1P78318 339 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 MRPS5P82675 430 aaKnown RBP14.02□□□□□ -0.17
SDC3-204ENST00000487984 MGAT3Q09327 533 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 PKN1Q16512 942 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 APBB2Q92870 758 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 PHKBQ93100 1093 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 ZBTB10Q96DT7 871 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 TGS1Q96RS0 853 aaKnown RBP14.02□□□□□ -0.17
SDC3-204ENST00000487984 IFIH1Q9BYX4 1025 aaKnown RBP14.02□□□□□ -0.17
SDC3-204ENST00000487984 ZMYND12Q9H0C1 365 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 AZI2Q9H6S1 392 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 INSL6Q9Y581 213 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 XIRP2A4UGR9 3374 aa14.02□□□□□ -0.17
SDC3-204ENST00000487984 MUC3AQ02505 3323 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 REV3LO60673 3130 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 FAM86B1E9PN63 330 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 PRPF3O43395 683 aaKnown RBP14.01□□□□□ -0.17
SDC3-204ENST00000487984 PPFIA3O75145 1194 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 FAM86B2P0C5J1 330 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 GHRP10912 638 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 INSRRP14616 1297 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 ZNF76P36508 570 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 HTRA4P83105 476 aaPredicted RBP14.01□□□□□ -0.17
SDC3-204ENST00000487984 PLCB4Q15147 1175 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 SKIV2LQ15477 1246 aaKnown RBP14.01□□□□□ -0.17
SDC3-204ENST00000487984 NTRK3Q16288 839 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 NIPA1Q7RTP0 329 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 RSPH3Q86UC2 560 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 DNAJB3Q8WWF6 145 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 CRYGNQ8WXF5 182 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 TOP1MTQ969P6 601 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 TSPYL2Q9H2G4 693 aaPredicted RBP14.01□□□□□ -0.17
SDC3-204ENST00000487984 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
SDC3-204ENST00000487984 IGLV3-22A0A075B6J6 115 aa14□□□□□ -0.17
SDC3-204ENST00000487984 RRN3P2A6NIE6 340 aa14□□□□□ -0.17
SDC3-204ENST00000487984 DDX39AO00148 427 aaKnown RBP14□□□□□ -0.17
SDC3-204ENST00000487984 ATG7O95352 703 aa14□□□□□ -0.17
SDC3-204ENST00000487984 CCNE2O96020 404 aa14□□□□□ -0.17
SDC3-204ENST00000487984 CYP3A4P08684 503 aa14□□□□□ -0.17
SDC3-204ENST00000487984 STAT5BP51692 787 aa14□□□□□ -0.17
SDC3-204ENST00000487984 TFF2Q03403 129 aa14□□□□□ -0.17
SDC3-204ENST00000487984 LPIN1Q14693 890 aa14□□□□□ -0.17
SDC3-204ENST00000487984 PLPPR4Q7Z2D5 763 aa14□□□□□ -0.17
SDC3-204ENST00000487984 PLA2G4DQ86XP0 818 aa14□□□□□ -0.17
SDC3-204ENST00000487984 REXO1Q8N1G1 1221 aaKnown RBP14□□□□□ -0.17
SDC3-204ENST00000487984 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
SDC3-204ENST00000487984 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
SDC3-204ENST00000487984 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
SDC3-204ENST00000487984 SUGCTQ9HAC7 445 aa14□□□□□ -0.17
SDC3-204ENST00000487984 NCOA5Q9HCD5 579 aaKnown RBP14□□□□□ -0.17
SDC3-204ENST00000487984 C6orf50Q9HD87 102 aa14□□□□□ -0.17
SDC3-204ENST00000487984 UPP2O95045 317 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 IFNAR1P17181 557 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 PDIA3P30101 505 aaKnown RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 EVCP57679 992 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 CCT2P78371 535 aaKnown RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 MRPS6P82932 125 aaKnown RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 FBXO47Q5MNV8 452 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 ABHD15Q6UXT9 468 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 RUFY3Q7L099 469 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 ADAMTS19Q8TE59 1207 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 TRAPPC12Q8WVT3 735 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 YME1L1Q96TA2 773 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 SLC26A6Q9BXS9 759 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 RNF26Q9BY78 433 aaPredicted RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 FAM49AQ9H0Q0 323 aaPredicted RBP13.99□□□□□ -0.17
SDC3-204ENST00000487984 CDY2AQ9Y6F7 541 aa13.99□□□□□ -0.17
SDC3-204ENST00000487984 MICAL3Q7RTP6 2002 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 COL4A4P53420 1690 aaPredicted RBP13.98□□□□□ -0.17
SDC3-204ENST00000487984 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 IPO5O00410 1097 aaKnown RBP13.98□□□□□ -0.17
SDC3-204ENST00000487984 DHX15O43143 795 aaKnown RBP13.98□□□□□ -0.17
SDC3-204ENST00000487984 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
SDC3-204ENST00000487984 GNA11P29992 359 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 MCTP2Q6DN12 878 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 RASGRP4Q8TDF6 673 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
SDC3-204ENST00000487984 ZSWIM6Q9HCJ5 1215 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 LMCD1Q9NZU5 365 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 VPS54Q9P1Q0 977 aa13.98□□□□□ -0.17
SDC3-204ENST00000487984 TNFRSF10AO00220 468 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms