RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 MGAT3Q09327 533 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 IKBKEQ14164 716 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GRIK4Q16099 956 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 FAM26DQ5JW98 314 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 KRT40Q6A162 431 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RPAINQ86UA6 219 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PPM1EQ8WY54 764 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ARNTL2Q8WYA1 636 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SEPT1Q8WYJ6 367 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ZBTB10Q96DT7 871 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ZMYND12Q9H0C1 365 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 NCOA5Q9HCD5 579 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 THEGQ9P2T0 379 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MTCH2Q9Y6C9 303 aa12.81□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MEIS1O00470 390 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MAFGO15525 162 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CHRNA1P02708 482 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GNAT1P11488 350 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ACTR2P61160 394 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 HTRA4P83105 476 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CCDC85BQ15834 202 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 TAF2Q6P1X5 1199 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 NIPA1Q7RTP0 329 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GDPD5Q8WTR4 605 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GLG1Q92896 1179 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RNF26Q9BY78 433 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GLT8D2Q9H1C3 349 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SMARCAD1Q9H4L7 1026 aa12.8□□□□□ -0.36
RAB11FIP3-210ENST00000487899 IGKV6D-21A0A0A0MT36 114 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PRPF3O43395 683 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CYP3A4P08684 503 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PDIA3P30101 505 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GRB10Q13322 594 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 JAKMIP3Q5VZ66 844 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MYOCDQ8IZQ8 938 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RASGRP4Q8TDF6 673 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 TRAPPC12Q8WVT3 735 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 LENG9Q96B70 501 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RAD9AQ99638 391 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ATG7O95352 703 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 GHRP10912 638 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 IFNAR1P17181 557 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 LPIN1Q14693 890 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SEPT8Q92599 483 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 SDF4Q9BRK5 362 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
RAB11FIP3-210ENST00000487899 DDX39AO00148 427 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 EDIL3O43854 480 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 AMHP03971 560 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 INSRRP14616 1297 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PSMA5P28066 241 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ERVK-21P61565 698 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 IGBP1P78318 339 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CCT2P78371 535 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 FBXO47Q5MNV8 452 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ABHD15Q6UXT9 468 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 DNAJB3Q8WWF6 145 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ATXN2LQ8WWM7 1075 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 APBB2Q92870 758 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MTUS1Q9ULD2 1270 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CDY2AQ9Y6F7 541 aa12.77□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZBTB42B2RXF5 422 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 NEFLP07196 543 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MRPS6P82932 125 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TFF2Q03403 129 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 NPY5RQ15761 445 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PLA2G4DQ86XP0 818 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TOP1MTQ969P6 601 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ASB2Q96Q27 587 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms