RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 DCP2Q8IU60 420 aaKnown RBP5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 RCBTB1Q8NDN9 531 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 CPLX3Q8WVH0 158 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 ANAPC16Q96DE5 110 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 C8orf49Q96NF6 230 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 GPR20Q99678 358 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 TRPM2O94759 1503 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 SHPRHQ149N8 1683 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 SMARCA5O60264 1052 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 B4GALT3O60512 393 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 SLC6A11P48066 632 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 MRM1Q6IN84 353 aaKnown RBP5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 C6orf15Q6UXA7 325 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 RIOX2Q8IUF8 465 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 FAM126BQ8IXS8 530 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 SEC14L1Q92503 715 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 MBD6Q96DN6 1003 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 MRRFQ96E11 262 aaKnown RBP5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 C1QTNF3Q9BXJ4 246 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 TIMM13Q9Y5L4 95 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 DCCP43146 1447 aa5.96□□□□□ -1.46
SNRNP40-205ENST00000486941 SETD1AO15047 1707 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 SMAD7O15105 426 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 AKAP8O43823 692 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 SCG5P05408 212 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 ZNF20P17024 532 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 ATF4P18848 351 aaPredicted RBP5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 ZNF143P52747 638 aaPredicted RBP5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 CDSNQ15517 529 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 SPHKAPQ2M3C7 1700 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 MEX3CQ5U5Q3 659 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 BRINP3Q76B58 766 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 ZNF227Q86WZ6 799 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 ARRDC4Q8NCT1 418 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 PTPRUQ92729 1446 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 C1orf159Q96HA4 380 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 MRVI1Q9Y6F6 885 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 SETBP1Q9Y6X0 1596 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 LRP6O75581 1613 aa5.95□□□□□ -1.46
SNRNP40-205ENST00000486941 XRN1Q8IZH2 1706 aaKnown RBP5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 MROH6A6NGR9 719 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 NOP56O00567 594 aaKnown RBP5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 ZNF28P17035 718 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 ECI1P42126 302 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 MLLT6P55198 1093 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 NCAPHQ15003 741 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 TESK1Q15569 626 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 FAM26FQ5R3K3 315 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 POMZP3Q6PJE2 187 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 PPP1R14AQ96A00 147 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 LRRC59Q96AG4 307 aaKnown RBP5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 SAMD11Q96NU1 681 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 TGIF2Q9GZN2 237 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 AP5M1Q9H0R1 490 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 PPP4R1LQ9P1A2 415 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 RBPJLQ9UBG7 517 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 NRXN3Q9Y4C0 1643 aa5.94□□□□□ -1.46
SNRNP40-205ENST00000486941 SETD5Q9C0A6 1442 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 KIF1BO60333 1816 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 TCRBV5S2A0A599 114 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 C1QTNF3-AMACRE9PGA6 284 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 TADA3O75528 432 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 LRG1P02750 347 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 GRIA2P42262 883 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 RPL11P62913 178 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 MROH9Q5TGP6 573 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 CPZQ66K79 652 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 FAM178BQ8IXR5 827 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 TTLL6Q8N841 843 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 DIO2Q92813 273 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 LOXL4Q96JB6 756 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 ST6GALNAC2Q9UJ37 374 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 CDK12Q9NYV4 1490 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 ASXL1Q8IXJ9 1541 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 METP08581 1390 aa5.93□□□□□ -1.46
SNRNP40-205ENST00000486941 NHSL1Q5SYE7 1610 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 MST1RQ04912 1400 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 HOXC12P31275 282 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 E4F1Q66K89 784 aaPredicted RBP5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 TMEM145Q8NBT3 493 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 ZCCHC14Q8WYQ9 949 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 TRMT2BQ96GJ1 504 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 BORCS6Q96GS4 357 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 ZSWIM3Q96MP5 696 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 YTHDC1Q96MU7 727 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 PTPN18Q99952 460 aa5.92□□□□□ -1.46
SNRNP40-205ENST00000486941 ADGRL3Q9HAR2 1447 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 NEXMIFQ5QGS0 1516 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 SUSD5O60279 629 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 SNRPB2P08579 225 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 IL13P35225 146 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 ETFBP38117 255 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 GFRA1P56159 465 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 ZXDAP98168 799 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 KIAA2012Q0VF49 1180 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 ICAM4Q14773 271 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 IQCEQ6IPM2 695 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 LGI4Q8N135 537 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms