RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ADAM9Q13443 819 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 SMAD4Q13485 552 aaKnown RBP6.69□□□□□ -1.34
COPS3-209ENST00000486810 RTP5Q14D33 572 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 PWP2Q15269 919 aaKnown RBP6.69□□□□□ -1.34
COPS3-209ENST00000486810 GPR19Q15760 415 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 TCERG1LQ5VWI1 586 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 ARHGAP36Q6ZRI8 547 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 KCTD1Q719H9 257 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 SIAH1Q8IUQ4 282 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 ZC3H7AQ8IWR0 971 aaKnown RBP6.69□□□□□ -1.34
COPS3-209ENST00000486810 SDR16C5Q8N3Y7 309 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 MAGEB10Q96LZ2 347 aaPredicted RBP6.69□□□□□ -1.34
COPS3-209ENST00000486810 HSPBP1Q9NZL4 362 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 RIPOR2Q9Y4F9 1068 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 CADPSQ9ULU8 1353 aa6.69□□□□□ -1.34
COPS3-209ENST00000486810 GOLIM4O00461 696 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 KCNK3O14649 394 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 MAFKO60675 156 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 NAT1P18440 290 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 DNM2P50570 870 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 LACTBP83111 547 aaPredicted RBP6.68□□□□□ -1.34
COPS3-209ENST00000486810 HDAC1Q13547 482 aaPredicted RBP6.68□□□□□ -1.34
COPS3-209ENST00000486810 PAN2Q504Q3 1202 aaKnown RBP6.68□□□□□ -1.34
COPS3-209ENST00000486810 LIPIQ6XZB0 460 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 OVCH1Q7RTY7 1134 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 PTRH1Q86Y79 214 aaKnown RBP6.68□□□□□ -1.34
COPS3-209ENST00000486810 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 LINC01356Q8N9X3 169 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 ZBTB8AQ96BR9 441 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 CATSPERZQ9NTU4 200 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 FANCLQ9NW38 375 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 FEZ2Q9UHY8 353 aaPredicted RBP6.68□□□□□ -1.34
COPS3-209ENST00000486810 SRPK3Q9UPE1 567 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 TBX22Q9Y458 520 aa6.68□□□□□ -1.34
COPS3-209ENST00000486810 SH3D21A4FU49 640 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 FAM90A27PA6NNH2 459 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 ZNF500O60304 480 aaPredicted RBP6.67□□□□□ -1.34
COPS3-209ENST00000486810 FAHP16930 419 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 NKX3-2P78367 333 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 PABPC4Q13310 644 aaKnown RBP eCLIP6.67□□□□□ -1.34
COPS3-209ENST00000486810 PRR31Q5SQ13 230 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.67□□□□□ -1.34
COPS3-209ENST00000486810 TMEM151BQ8IW70 566 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 NLGN1Q8N2Q7 840 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 CISD2Q8N5K1 135 aaKnown RBP6.67□□□□□ -1.34
COPS3-209ENST00000486810 CELF4Q9BZC1 486 aaKnown RBP6.67□□□□□ -1.34
COPS3-209ENST00000486810 TSPYL1Q9H0U9 437 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 NUB1Q9Y5A7 615 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 CD2APQ9Y5K6 639 aa6.67□□□□□ -1.34
COPS3-209ENST00000486810 ZCCHC6Q5VYS8 1495 aaKnown RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 FAM83GA6ND36 823 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 RFPL3O75679 317 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 ZSCAN20P17040 1043 aaPredicted RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 KRT15P19012 456 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 LMOD3Q0VAK6 560 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 MTA1Q13330 715 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 ZNF460Q14592 562 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 SEC23AQ15436 765 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 TM4SF20Q53R12 229 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 GIMAP6Q6P9H5 292 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 ANKRD23Q86SG2 305 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 ZC3H18Q86VM9 953 aaKnown RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 MARCH10Q8NA82 808 aaPredicted RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 KYQ8NBH2 561 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 KCNC2Q96PR1 638 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 YIPF4Q9BSR8 244 aa6.66□□□□□ -1.34
COPS3-209ENST00000486810 ZHX1Q9UKY1 873 aaPredicted RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 TNPO3Q9Y5L0 923 aaKnown RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 CFAP65Q6ZU64 1925 aaKnown RBP6.66□□□□□ -1.34
COPS3-209ENST00000486810 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.34
COPS3-209ENST00000486810 ST5P78524 1137 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 CRY1Q16526 586 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 FAM47CQ5HY64 1035 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 TMC5Q6UXY8 1006 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.34
COPS3-209ENST00000486810 HOMER1Q86YM7 354 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 NOSTRINQ8IVI9 506 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 NGEFQ8N5V2 710 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 IGSF22Q8N9C0 903 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 ZSWIM3Q96MP5 696 aa6.65□□□□□ -1.34
COPS3-209ENST00000486810 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
COPS3-209ENST00000486810 MECP2P51608 486 aaKnown RBP6.64□□□□□ -1.35
COPS3-209ENST00000486810 SLURP1P55000 103 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 TMEM177Q53S58 311 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 FIGNQ5HY92 759 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 PHF19Q5T6S3 580 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 L1TD1Q5T7N2 865 aaKnown RBP6.64□□□□□ -1.35
COPS3-209ENST00000486810 HHIPL2Q6UWX4 724 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 C16orf86Q6ZW13 317 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 APPBP2Q92624 585 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 PCDH18Q9HCL0 1135 aa6.64□□□□□ -1.35
COPS3-209ENST00000486810 GLRX3O76003 335 aaKnown RBP6.63□□□□□ -1.35
COPS3-209ENST00000486810 C4BPAP04003 597 aaKnown RBP6.63□□□□□ -1.35
COPS3-209ENST00000486810 ASLP04424 464 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
COPS3-209ENST00000486810 BMP7P18075 431 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms