RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 SDF4Q9BRK5 362 aa25.61■■□□□ 1.69
SREBF1-214ENST00000486311 DOCK5Q9H7D0 1870 aa25.6■■□□□ 1.69
SREBF1-214ENST00000486311 ARP10275 920 aa25.6■■□□□ 1.69
SREBF1-214ENST00000486311 SREBF1P36956 1147 aa25.6■■□□□ 1.69
SREBF1-214ENST00000486311 CLK2P49760 499 aaKnown RBP25.6■■□□□ 1.69
SREBF1-214ENST00000486311 C17orf80Q9BSJ5 609 aa25.6■■□□□ 1.69
SREBF1-214ENST00000486311 TCF20Q9UGU0 1960 aaKnown RBP25.59■■□□□ 1.69
SREBF1-214ENST00000486311 MEIS1O00470 390 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 ADD1P35611 737 aaKnown RBP25.59■■□□□ 1.69
SREBF1-214ENST00000486311 KCNQ1P51787 676 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 ACTR2P61160 394 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 FGD1P98174 961 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 ITGB3BPQ13352 177 aaPredicted RBP25.59■■□□□ 1.69
SREBF1-214ENST00000486311 HLA-CQ95604 372 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 YME1L1Q96TA2 773 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 AZI2Q9H6S1 392 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 AGO4Q9HCK5 861 aaKnown RBP25.59■■□□□ 1.69
SREBF1-214ENST00000486311 TMEM260Q9NX78 707 aa25.59■■□□□ 1.69
SREBF1-214ENST00000486311 NAP1L2Q9ULW6 460 aaPredicted RBP25.59■■□□□ 1.69
SREBF1-214ENST00000486311 CCDC196A0A1B0GTZ2 297 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 RRN3P2A6NIE6 340 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 GHRP10912 638 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 INSRRP14616 1297 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 CPA1P15085 419 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 HSPA4P34932 840 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 METAP2P50579 478 aaKnown RBP eCLIP25.58■■□□□ 1.69
SREBF1-214ENST00000486311 LPIN1Q14693 890 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 PFKFB3Q16875 520 aaPredicted RBP25.58■■□□□ 1.69
SREBF1-214ENST00000486311 Q6ZUG5 572 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 PLPPR4Q7Z2D5 763 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 FBXO22Q8NEZ5 403 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 DNAJB3Q8WWF6 145 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 TNPO1Q92973 898 aaKnown RBP25.58■■□□□ 1.69
SREBF1-214ENST00000486311 JAKMIP1Q96N16 626 aaKnown RBP25.58■■□□□ 1.69
SREBF1-214ENST00000486311 SAMD11Q96NU1 681 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 SNX14Q9Y5W7 946 aa25.58■■□□□ 1.69
SREBF1-214ENST00000486311 UPP2O95045 317 aa25.57■■□□□ 1.68
SREBF1-214ENST00000486311 RPLP2P05387 115 aaKnown RBP25.57■■□□□ 1.68
SREBF1-214ENST00000486311 IGBP1P78318 339 aa25.57■■□□□ 1.68
SREBF1-214ENST00000486311 APOBRQ0VD83 1088 aa25.57■■□□□ 1.68
SREBF1-214ENST00000486311 NIPA1Q7RTP0 329 aa25.57■■□□□ 1.68
SREBF1-214ENST00000486311 BDP1A6H8Y1 2624 aa25.57■■□□□ 1.68
SREBF1-214ENST00000486311 COL4A4P53420 1690 aaPredicted RBP25.56■■□□□ 1.68
SREBF1-214ENST00000486311 ATG7O95352 703 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 SCG2P13521 617 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 PLCB4Q15147 1175 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 FBXO47Q5MNV8 452 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 BLOC1S2Q6QNY1 142 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 FBXL16Q8N461 479 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 BRF1Q92994 677 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 TRPC6Q9Y210 931 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 CDY2AQ9Y6F7 541 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 NCOR1O75376 2440 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 MICAL3Q7RTP6 2002 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 NID2Q14112 1375 aa25.56■■□□□ 1.68
SREBF1-214ENST00000486311 ESYT2A0FGR8 921 aa25.55■■□□□ 1.68
SREBF1-214ENST00000486311 ZNF76P36508 570 aa25.55■■□□□ 1.68
SREBF1-214ENST00000486311 STAT5BP51692 787 aa25.55■■□□□ 1.68
SREBF1-214ENST00000486311 MRPS6P82932 125 aaKnown RBP25.55■■□□□ 1.68
SREBF1-214ENST00000486311 EPC2Q52LR7 807 aa25.55■■□□□ 1.68
SREBF1-214ENST00000486311 ZBTB10Q96DT7 871 aa25.55■■□□□ 1.68
SREBF1-214ENST00000486311 NECAB3Q96P71 396 aaPredicted RBP25.55■■□□□ 1.68
SREBF1-214ENST00000486311 COL4A6Q14031 1691 aa25.55■■□□□ 1.68
SREBF1-214ENST00000486311 JAKMIP3Q5VZ66 844 aa25.54■■□□□ 1.68
SREBF1-214ENST00000486311 TSHZ1Q6ZSZ6 1077 aa25.54■■□□□ 1.68
SREBF1-214ENST00000486311 CRYGNQ8WXF5 182 aa25.54■■□□□ 1.68
SREBF1-214ENST00000486311 CCDC136Q96JN2 1154 aa25.54■■□□□ 1.68
SREBF1-214ENST00000486311 ZMYND12Q9H0C1 365 aa25.54■■□□□ 1.68
SREBF1-214ENST00000486311 PCDHA2Q9Y5H9 948 aa25.54■■□□□ 1.68
SREBF1-214ENST00000486311 IGKV6D-21A0A0A0MT36 114 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 FAM86B1E9PN63 330 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 PRPF3O43395 683 aaKnown RBP25.53■■□□□ 1.68
SREBF1-214ENST00000486311 CCNE2O96020 404 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 CYP3A4P08684 503 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 FAM86B2P0C5J1 330 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 RPS6KB1P23443 525 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 SLC26A2P50443 739 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 PKN1Q16512 942 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 IER5Q5VY09 327 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 IL17RAQ96F46 866 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 AGXT2Q9BYV1 514 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 FAM49AQ9H0Q0 323 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-214ENST00000486311 SQORQ9Y6N5 450 aa25.53■■□□□ 1.68
SREBF1-214ENST00000486311 ENPP3O14638 875 aa25.52■■□□□ 1.68
SREBF1-214ENST00000486311 MCTP2Q6DN12 878 aa25.52■■□□□ 1.68
SREBF1-214ENST00000486311 PLA2G4DQ86XP0 818 aa25.52■■□□□ 1.68
SREBF1-214ENST00000486311 TMEM192Q8IY95 271 aa25.52■■□□□ 1.68
SREBF1-214ENST00000486311 CCDC12Q8WUD4 166 aaPredicted RBP25.52■■□□□ 1.68
SREBF1-214ENST00000486311 MRPL38Q96DV4 380 aaKnown RBP25.52■■□□□ 1.68
SREBF1-214ENST00000486311 C6orf50Q9HD87 102 aa25.52■■□□□ 1.68
SREBF1-214ENST00000486311 IGLV3-22A0A075B6J6 115 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 POTEB3A0JP26 581 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 H3BNC9 293 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 DHX15O43143 795 aaKnown RBP25.51■■□□□ 1.67
SREBF1-214ENST00000486311 PTPROQ16827 1216 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 POTEBQ6S5H4 581 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 ABHD15Q6UXT9 468 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 TRAPPC12Q8WVT3 735 aa25.51■■□□□ 1.67
SREBF1-214ENST00000486311 AGO3Q9H9G7 860 aaKnown RBP25.51■■□□□ 1.67
SREBF1-214ENST00000486311 TRPV2Q9Y5S1 764 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms