RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 CTSHP09668 335 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 INSRRP14616 1297 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 CIITAP33076 1130 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 DEFB103AP81534 67 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 MARCH8Q5T0T0 291 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 RUFY4Q6ZNE9 571 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 TUBE1Q9UJT0 475 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 TET1Q8NFU7 2136 aa20.93■□□□□ 0.94
PRPF40A-209ENST00000486100 IGKV6D-21A0A0A0MT36 114 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 CCNE2O96020 404 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 SETQ01105 290 aaPredicted RBP20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 ADGRE1Q14246 886 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 PLCB4Q15147 1175 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 ABHD15Q6UXT9 468 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 RSPH3Q86UC2 560 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 SEPT8Q92599 483 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 ZNF577Q9BSK1 485 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 ZBED2Q9BTP6 218 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 TBC1D22BQ9NU19 505 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 DOCK5Q9H7D0 1870 aa20.92■□□□□ 0.94
PRPF40A-209ENST00000486100 CDH23Q9H251 3354 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 RBAK-RBAKDNI3L0D1 243 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 DDX39AO00148 427 aaKnown RBP20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 CHRNA1P02708 482 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 SLC26A2P50443 739 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 USP11P51784 963 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 IGBP1P78318 339 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 TAP1Q03518 808 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 MKRN4PQ13434 485 aaPredicted RBP20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 TMCO2Q7Z6W1 182 aaPredicted RBP20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 FAM177A1Q8N128 213 aaPredicted RBP20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 RAD9AQ99638 391 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 OSBPL7Q9BZF2 842 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 PCDHA4Q9UN74 947 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 TRPC6Q9Y210 931 aa20.91■□□□□ 0.94
PRPF40A-209ENST00000486100 CHD9Q3L8U1 2897 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 EDIL3O43854 480 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 GJB5O95377 273 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 IGFBP4P22692 258 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 SCRN1Q12765 414 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 PRR16Q569H4 304 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.9■□□□□ 0.943e-21■■■■■ 31.7
PRPF40A-209ENST00000486100 IL17RAQ96F46 866 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 UIMC1Q96RL1 719 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 C22orf23Q9BZE7 217 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 SLKQ9H2G2 1235 aaPredicted RBP20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 TPCN1Q9ULQ1 816 aa20.9■□□□□ 0.94
PRPF40A-209ENST00000486100 POTEB3A0JP26 581 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 BACH1O14867 736 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 PFKFB2O60825 505 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 CDKL5O76039 1030 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 AMHP03971 560 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 RPLP2P05387 115 aaKnown RBP20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 ANKRD1Q15327 319 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 FAM160B1Q5W0V3 765 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 GALNT17Q6IS24 598 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 ZNF746Q6NUN9 644 aaPredicted RBP20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 POTEBQ6S5H4 581 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 DNAJB3Q8WWF6 145 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 APBB2Q92870 758 aa20.89■□□□□ 0.93
PRPF40A-209ENST00000486100 HBP1O60381 514 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 ARHGEF15O94989 841 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 MGAT3Q09327 533 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 SWSAP1Q6NVH7 229 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 BLIDQ8IZY5 108 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 LENG9Q96B70 501 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 CERS4Q9HA82 394 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 ZNF302Q9NR11 478 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 PCDHA2Q9Y5H9 948 aa20.88■□□□□ 0.93
PRPF40A-209ENST00000486100 LCHNA4D1U4 455 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 M0R2N6 131 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 AK2P54819 239 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 KRT76Q01546 638 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 PDXDC2PQ6P474 469 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 CCDC60Q8IWA6 550 aaPredicted RBP20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 SMAP1Q8IYB5 467 aaPredicted RBP20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 MYOCDQ8IZQ8 938 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 USP38Q8NB14 1042 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 DAGLBQ8NCG7 672 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 TBCKQ8TEA7 893 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 ATP8B4Q8TF62 1192 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 ZBTB10Q96DT7 871 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 AIFM3Q96NN9 605 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 IFIH1Q9BYX4 1025 aaKnown RBP20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
PRPF40A-209ENST00000486100 RFXAPO00287 272 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 DLL1O00548 723 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 NPY5RQ15761 445 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 IER5Q5VY09 327 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 FAM117BQ6P1L5 589 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 MTHFD1LQ6UB35 978 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 TRAPPC12Q8WVT3 735 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 PPM1EQ8WY54 764 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 ARNTL2Q8WYA1 636 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 TOP1MTQ969P6 601 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 FAM49AQ9H0Q0 323 aaPredicted RBP20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 TCEAL9Q9UHQ7 104 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms