RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 IKBKEQ14164 716 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 ANKRD1Q15327 319 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 NIPA1Q7RTP0 329 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 DBF4BQ8NFT6 615 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 PPM1EQ8WY54 764 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 SLC9A7Q96T83 725 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 FAM49AQ9H0Q0 323 aaPredicted RBP20.05■□□□□ 0.8
COL6A1-204ENST00000486023 TUBE1Q9UJT0 475 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 PCDHA11Q9Y5I1 949 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 KIF28PB7ZC32 967 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 PFKFB2O60825 505 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 BAIAP3O94812 1187 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 CXCL10P02778 98 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 IGFBP4P22692 258 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 WDR5P61964 334 aaKnown RBP20.04■□□□□ 0.8
COL6A1-204ENST00000486023 SWSAP1Q6NVH7 229 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 HERC6Q8IVU3 1022 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 BLIDQ8IZY5 108 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 MAFAQ8NHW3 353 aaPredicted RBP20.04■□□□□ 0.8
COL6A1-204ENST00000486023 TBCKQ8TEA7 893 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 TRAPPC12Q8WVT3 735 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 DNAJB3Q8WWF6 145 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 CRYGNQ8WXF5 182 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 OSBPL7Q9BZF2 842 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 SAMM50Q9Y512 469 aa20.04■□□□□ 0.8
COL6A1-204ENST00000486023 EMSYQ7Z589 1322 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 TLL1O43897 1013 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 CA3P07451 260 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 DEFB103AP81534 67 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 SETQ01105 290 aaPredicted RBP20.03■□□□□ 0.8
COL6A1-204ENST00000486023 PLCB4Q15147 1175 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 FAM160B1Q5W0V3 765 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 MIS18BP1Q6P0N0 1132 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 CKAP2LQ8IYA6 745 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 PHOSPHO2Q8TCD6 241 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 GAS2L1Q99501 681 aaPredicted RBP20.03■□□□□ 0.8
COL6A1-204ENST00000486023 GJB4Q9NTQ9 266 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 TBC1D22BQ9NU19 505 aa20.03■□□□□ 0.8
COL6A1-204ENST00000486023 TRIP12Q14669 1992 aaPredicted RBP20.03■□□□□ 0.8
COL6A1-204ENST00000486023 ABHD14A-ACY1A0A1B0GW23 586 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 POTEB3A0JP26 581 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 DHX15O43143 795 aaKnown RBP20.02■□□□□ 0.8
COL6A1-204ENST00000486023 ADAM17P78536 824 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 PDXDC2PQ6P474 469 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 POTEBQ6S5H4 581 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 ABHD15Q6UXT9 468 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.02■□□□□ 0.8
COL6A1-204ENST00000486023 PLPPR4Q7Z2D5 763 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 RSPH3Q86UC2 560 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 SEPT8Q92599 483 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.8
COL6A1-204ENST00000486023 GJA10Q969M2 543 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 ZNF302Q9NR11 478 aa20.02■□□□□ 0.8
COL6A1-204ENST00000486023 ORC3Q9UBD5 711 aaPredicted RBP20.02■□□□□ 0.8
COL6A1-204ENST00000486023 RRN3P2A6NIE6 340 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 CHMP2AO43633 222 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 LARGE1O95461 756 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 XBP1P17861 261 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 USP11P51784 963 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 FOSBP53539 338 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 TMEM62Q0P6H9 643 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 ME3Q16798 604 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 MARCH8Q5T0T0 291 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 TAF2Q6P1X5 1199 aa20.01■□□□□ 0.79
COL6A1-204ENST00000486023 CCDC60Q8IWA6 550 aaPredicted RBP20.01■□□□□ 0.79
COL6A1-204ENST00000486023 CDH23Q9H251 3354 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 UPP2O95045 317 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 ATG7O95352 703 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 CHRNA1P02708 482 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 GHRP10912 638 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 CIITAP33076 1130 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 CCDC85BQ15834 202 aaPredicted RBP20■□□□□ 0.79
COL6A1-204ENST00000486023 MYOCDQ8IZQ8 938 aa20■□□□□ 0.79
COL6A1-204ENST00000486023 RFXAPO00287 272 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 MSH4O15457 936 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 EDIL3O43854 480 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 CAND2O75155 1236 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 CTDNEP1O95476 244 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 TDP2O95551 362 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 PSAPP07602 524 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 NONOQ15233 471 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL6A1-204ENST00000486023 INF2Q27J81 1249 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 PLEKHG4Q58EX7 1191 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 MICALL1Q8N3F8 863 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 ARNTL2Q8WYA1 636 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 GABBR1Q9UBS5 961 aa19.99■□□□□ 0.79
COL6A1-204ENST00000486023 CCDC194A0A1B0GVG4 234 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 LCHNA4D1U4 455 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 GAS7O60861 476 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 EFCAB14O75071 495 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 AMHP03971 560 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 KRT76Q01546 638 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 LETM2Q2VYF4 491 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 GALNT17Q6IS24 598 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 ZNF746Q6NUN9 644 aaPredicted RBP19.98■□□□□ 0.79
COL6A1-204ENST00000486023 TET1Q8NFU7 2136 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 LENG9Q96B70 501 aa19.98■□□□□ 0.79
COL6A1-204ENST00000486023 IFIH1Q9BYX4 1025 aaKnown RBP19.98■□□□□ 0.79
COL6A1-204ENST00000486023 MTUS1Q9ULD2 1270 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms