RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 MT-ND3P03897 115 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 MX2P20592 715 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 CLEC4GQ6UXB4 293 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 SNX19Q92543 992 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 EEF2KMTQ96G04 330 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 ACAP3Q96P50 834 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 RMDN3Q96TC7 470 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 ZBTB18Q99592 522 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 GNGT1P63211 74 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 TAF11Q15544 211 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 PDCD2Q16342 344 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 ANGPTL8Q6UXH0 198 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 ATP6V0A4Q9HBG4 840 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 NGRNQ9NPE2 291 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 PRDM5Q9NQX1 630 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 DYRK4Q9NR20 520 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 STRIP2Q9ULQ0 834 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 CLDN3O15551 220 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 OAS2P29728 719 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 GUCY2DQ02846 1103 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 FRA10AC1Q70Z53 315 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 KSR1Q8IVT5 923 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 FEM1BQ9UK73 627 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 CLIC4Q9Y696 253 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 NPHP4O75161 1426 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 GFPT2O94808 682 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 BRD1O95696 1058 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 CA4P22748 312 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 COPB2P35606 906 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 CRKP46108 304 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 NSUN6Q8TEA1 469 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 LZICQ8WZA0 190 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 DYNLL2Q96FJ2 89 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 IFT43Q96FT9 208 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 NDUFA8P51970 172 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 PEX3P56589 373 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 UBE2SQ16763 222 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 CYP4F22Q6NT55 531 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 PDCD6IPQ8WUM4 868 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 TACO1Q9BSH4 297 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 KIAA1586Q9HCI6 787 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 KRT82Q9NSB4 513 aa11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 DBNLQ9UJU6 430 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-207ENST00000485983 TMCC1O94876 653 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 TAC1P20366 129 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SH3BGRP55822 239 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF445P59923 1031 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 MECOMQ03112 1051 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 AP3B2Q13367 1082 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 RCN2Q14257 317 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 TCP11X2Q5H9J9 407 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 GIPC2Q8TF65 315 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 DRC3Q9H069 523 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SCINQ9Y6U3 715 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 PALLDQ8WX93 1383 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 FAM95CA0A1B0GW59 222 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SUN1O94901 812 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 MTMR1Q13613 665 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SZRD1Q7Z422 152 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 LCORLQ8N3X6 602 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SUGT1Q9Y2Z0 365 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 A0A1W2PQ27 194 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 A0A1W2PQ64 194 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 A0A1W2PQD8 194 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 KCNJ6P48051 423 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 CDO1Q16878 200 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 DEPDC1BQ8WUY9 529 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 ASIC4Q96FT7 647 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 CCDC138Q96M89 665 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 MRPL46Q9H2W6 279 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 TRIM45Q9H8W5 580 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 HACD3Q9P035 362 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 KIF28PB7ZC32 967 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 PYGLP06737 847 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 FCER1AP12319 257 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 ARHGDIAP52565 204 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 DRP2Q13474 957 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 ACCSLQ4AC99 568 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 C10orf76Q5T2E6 689 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF658Q5TYW1 1059 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 SPATA17Q96L03 361 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 MAGEB5Q9BZ81 275 aa11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 INTS9Q9NV88 658 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-207ENST00000485983 TARBP1Q13395 1621 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 IGSF3O75054 1194 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 SCRN1Q12765 414 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 TAF1BQ53T94 588 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms