RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ARVCFO00192 962 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 PSAPP07602 524 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 SFNP31947 248 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 RNPEPQ9H4A4 650 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 SMARCAD1Q9H4L7 1026 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 AZI2Q9H6S1 392 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 ZNF302Q9NR11 478 aa17.43■□□□□ 0.38
RPUSD3-217ENST00000485705 EVPLQ92817 2033 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 LAD1O00515 517 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 ATP4AP20648 1035 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 CDK7P50613 346 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 DNM1Q05193 864 aaKnown RBP17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 SNX17Q15036 470 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 EPHA7Q15375 998 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 TRIM60Q495X7 471 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 PDXDC2PQ6P474 469 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 PLPPR4Q7Z2D5 763 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 SLC43A3Q8NBI5 491 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 BANK1Q8NDB2 785 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 RDM1Q8NG50 284 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 KATNAL1Q9BW62 490 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 HDAC6Q9UBN7 1215 aa17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 MAFBQ9Y5Q3 323 aaPredicted RBP17.42■□□□□ 0.38
RPUSD3-217ENST00000485705 CEP290O15078 2479 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 ZNF862O60290 1169 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 PRPHP41219 470 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 RTP1P59025 263 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 NUCB2P80303 420 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 GRIN1Q05586 938 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 HIC1Q14526 733 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 FAM160B1Q5W0V3 765 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 DTHD1Q6ZMT9 781 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 TRMT1LQ7Z2T5 733 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 IPO9Q96P70 1041 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 EIF2AK1Q9BQI3 630 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 ZNF215Q9UL58 517 aaPredicted RBP17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 CEP131Q9UPN4 1083 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 IGSF9BQ9UPX0 1349 aa17.41■□□□□ 0.38
RPUSD3-217ENST00000485705 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 PP2D1A8MPX8 630 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 BMP15O95972 392 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 SMIM10L2AP0DMW4 78 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 SMIM10L2BP0DMW5 78 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 NASPP49321 788 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 RGS19P49795 217 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 ZNF200P98182 395 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 CYP4A11Q02928 519 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 CTTNQ14247 550 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 TMEM266Q2M3C6 531 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 NFRKBQ6P4R8 1299 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
RPUSD3-217ENST00000485705 PQBP1O60828 265 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 STBD1O95210 358 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 CDC25AP30304 524 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 TLE2Q04725 743 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 SLC39A14Q15043 492 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 C1orf53Q5VUE5 145 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 ARL6IP4Q66PJ3 421 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 GDF6Q6KF10 455 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 LINC00301Q8NCQ3 95 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 HSD17B14Q9BPX1 270 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 TRPV6Q9H1D0 765 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 TRMT13Q9NUP7 481 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 SETD4Q9NVD3 440 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 GTF2IRD1Q9UHL9 959 aa17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 FBXO2Q9UK22 296 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-217ENST00000485705 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 TMEM150BA6NC51 233 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 B4GALT4O60513 344 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 MED24O75448 989 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 SLITRK3O94933 977 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 SPATA31C1P0DKV0 1188 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 INSRRP14616 1297 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 QARSP47897 775 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 PSMC5P62195 406 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 PRKCEQ02156 737 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 STK38Q15208 465 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 SESTD1Q86VW0 696 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 TPH2Q8IWU9 490 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 FAM126BQ8IXS8 530 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 ATP8B4Q8TF62 1192 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 LXNQ9BS40 222 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 LRWD1Q9UFC0 647 aa17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-217ENST00000485705 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms