RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
SSR4-210ENST00000485612 DIAPH3Q9NSV4 1193 aa14.14□□□□□ -0.15
SSR4-210ENST00000485612 ZSWIM5Q9P217 1185 aa14.14□□□□□ -0.15
SSR4-210ENST00000485612 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
SSR4-210ENST00000485612 FSD2A1L4K1 749 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 OPLAHO14841 1288 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 LGALS2P05162 132 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 MYCLP12524 364 aaPredicted RBP14.13□□□□□ -0.15
SSR4-210ENST00000485612 DUSP6Q16828 381 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 PAN2Q504Q3 1202 aaKnown RBP14.13□□□□□ -0.15
SSR4-210ENST00000485612 ANKRD54Q6NXT1 300 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 IQCA1Q86XH1 822 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 KIAA2013Q8IYS2 634 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 STAG2Q8N3U4 1231 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 EXOC6Q8TAG9 804 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 CDCA3Q99618 268 aaPredicted RBP14.13□□□□□ -0.15
SSR4-210ENST00000485612 APOL5Q9BWW9 433 aa14.13□□□□□ -0.15
SSR4-210ENST00000485612 ZFHX4Q86UP3 3567 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 CACNA1BQ00975 2339 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 DHX16O60231 1041 aaKnown RBP14.12□□□□□ -0.15
SSR4-210ENST00000485612 SRGAP2BP0DMP2 458 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 TECP42680 631 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 SP2Q02086 613 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 LPIN1Q14693 890 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 ASPRV1Q53RT3 343 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 TMEM184AQ6ZMB5 413 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
SSR4-210ENST00000485612 SMOC2Q9H3U7 446 aa14.12□□□□□ -0.15
SSR4-210ENST00000485612 RWDD1Q9H446 243 aaPredicted RBP14.12□□□□□ -0.15
SSR4-210ENST00000485612 DMXL1Q9Y485 3027 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 PPP1R11O60927 126 aaPredicted RBP14.11□□□□□ -0.15
SSR4-210ENST00000485612 LMNAP02545 664 aaKnown RBP14.11□□□□□ -0.15
SSR4-210ENST00000485612 PARP1P09874 1014 aaKnown RBP14.11□□□□□ -0.15
SSR4-210ENST00000485612 ARHGAP4P98171 946 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 ANGPT1Q15389 498 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 SLC35G1Q2M3R5 365 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 SYCE2Q6PIF2 218 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 CYB5R4Q7L1T6 521 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 DSCC1Q9BVC3 393 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 USP26Q9BXU7 913 aa14.11□□□□□ -0.15
SSR4-210ENST00000485612 MRPL11Q9Y3B7 192 aaKnown RBP14.11□□□□□ -0.15
SSR4-210ENST00000485612 C2CD4DB7Z1M9 353 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 NOP56O00567 594 aaKnown RBP14.1□□□□□ -0.15
SSR4-210ENST00000485612 CFBP00751 764 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 TGFB3P10600 412 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 UBA1P22314 1058 aaKnown RBP14.1□□□□□ -0.15
SSR4-210ENST00000485612 ADAM17P78536 824 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 UBE3AQ05086 875 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 SEC23AQ15436 765 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 IMMTQ16891 758 aaKnown RBP14.1□□□□□ -0.15
SSR4-210ENST00000485612 CCDC178Q5BJE1 867 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 NPAS4Q8IUM7 802 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 CRIPAKQ8N1N5 446 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 FLCNQ8NFG4 579 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 IL31RAQ8NI17 732 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 LMBR1Q8WVP7 490 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 SEMA4AQ9H3S1 761 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 SUPT16HQ9Y5B9 1047 aaKnown RBP14.1□□□□□ -0.15
SSR4-210ENST00000485612 PCDHB12Q9Y5F1 795 aa14.1□□□□□ -0.15
SSR4-210ENST00000485612 STAG3L1P0CL83 205 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 PDE4AP27815 886 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 ERVFC1P60507 584 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 MGAT3Q09327 533 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 KCNC3Q14003 757 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 FBXO47Q5MNV8 452 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 PDE12Q6L8Q7 609 aaKnown RBP14.09□□□□□ -0.15
SSR4-210ENST00000485612 RTN4RL1Q86UN2 441 aaPredicted RBP14.09□□□□□ -0.15
SSR4-210ENST00000485612 CCDC105Q8IYK2 499 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 LINC01599Q8WXQ3 324 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 ZFP91Q96JP5 570 aaPredicted RBP14.09□□□□□ -0.15
SSR4-210ENST00000485612 PDCD2LQ9BRP1 358 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 BCAS3Q9H6U6 928 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 DLL3Q9NYJ7 618 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 MAD2L2Q9UI95 211 aa14.09□□□□□ -0.15
SSR4-210ENST00000485612 KIAA1671Q9BY89 1806 aa14.08□□□□□ -0.15
SSR4-210ENST00000485612 WDR81Q562E7 1941 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 GVINP1Q7Z2Y8 2422 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 PI15O43692 258 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 ASGR2P07307 311 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
SSR4-210ENST00000485612 HOXB8P17481 243 aaPredicted RBP14.08□□□□□ -0.16
SSR4-210ENST00000485612 HOXA13P31271 388 aaPredicted RBP14.08□□□□□ -0.16
SSR4-210ENST00000485612 GATMP50440 423 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 HSD17B4P51659 736 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 AAMPQ13685 434 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 SPOUT1Q5T280 376 aaKnown RBP14.08□□□□□ -0.16
SSR4-210ENST00000485612 IFIT1BQ5T764 474 aaKnown RBP14.08□□□□□ -0.16
SSR4-210ENST00000485612 CWF19L1Q69YN2 538 aaKnown RBP14.08□□□□□ -0.16
SSR4-210ENST00000485612 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 TSHZ1Q6ZSZ6 1077 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 RSPH3Q86UC2 560 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
SSR4-210ENST00000485612 MTMR8Q96EF0 704 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 UBAC1Q9BSL1 405 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 KRT23Q9C075 422 aa14.08□□□□□ -0.16
SSR4-210ENST00000485612 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms