RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 ITGB8P26012 769 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 TXKP42681 527 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 EPHB4P54760 987 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
TRA2B-213ENST00000485530 CALCRLQ16602 461 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 C1orf53Q5VUE5 145 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 LRCH2Q5VUJ6 765 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 SEPT1Q8WYJ6 367 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
TRA2B-213ENST00000485530 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 TSEN34Q9BSV6 310 aaKnown RBP13.81□□□□□ -0.2
TRA2B-213ENST00000485530 GAS7O60861 476 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 MYL3P08590 195 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 ATP4AP20648 1035 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 DNAJB2P25686 324 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 CPT1AP50416 773 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 PSMC6P62333 389 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
TRA2B-213ENST00000485530 TRIM50Q86XT4 487 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
TRA2B-213ENST00000485530 SPC25Q9HBM1 224 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 PCDHA12Q9UN75 941 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 DOCK5Q9H7D0 1870 aa13.8□□□□□ -0.2
TRA2B-213ENST00000485530 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 A0A1W2PQ45 241 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 A0A1W2PQY0 241 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 LGR5O75473 907 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 ZNF286BP0CG31 522 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 TCF7P36402 384 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 TECP42680 631 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 DNM1Q05193 864 aaKnown RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 GRIN1Q05586 938 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 PPP2R5CQ13362 524 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 HIC1Q14526 733 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 DGKDQ16760 1214 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 UTP14CQ5TAP6 766 aaKnown RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 PCSK9Q8NBP7 692 aaKnown RBP13.79□□□□□ -0.2
TRA2B-213ENST00000485530 TEKT3Q9BXF9 490 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
TRA2B-213ENST00000485530 HAS3O00219 553 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
TRA2B-213ENST00000485530 CHMP2AO43633 222 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 STBD1O95210 358 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 BAG4O95429 457 aaKnown RBP13.78□□□□□ -0.2
TRA2B-213ENST00000485530 LGALS2P05162 132 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 KRT76Q01546 638 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 TLE2Q04725 743 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 UGCGQ16739 394 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 CCDC60Q8IWA6 550 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-213ENST00000485530 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-213ENST00000485530 PCDHA10Q9Y5I2 948 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 ELP1O95163 1332 aa13.78□□□□□ -0.2
TRA2B-213ENST00000485530 CHD9Q3L8U1 2897 aa13.77□□□□□ -0.2
TRA2B-213ENST00000485530 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 POTEMA6NI47 508 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 H3BRB1 525 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 ZNF862O60290 1169 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 MARCH6O60337 910 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 KPNA6O60684 536 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 F2P00734 622 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 CLTBP09497 229 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-213ENST00000485530 CDC25AP30304 524 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-213ENST00000485530 CDK7P50613 346 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 SLC43A3Q8NBI5 491 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 LINC00301Q8NCQ3 95 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
TRA2B-213ENST00000485530 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-213ENST00000485530 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
TRA2B-213ENST00000485530 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 RGL1Q9NZL6 768 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 THEGQ9P2T0 379 aa13.77□□□□□ -0.21
TRA2B-213ENST00000485530 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-213ENST00000485530 A0A087WWV3 80 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 RBAK-RBAKDNI3L0D1 243 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 ZBTB39O15060 712 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 ZEB2O60315 1214 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 SLITRK3O94933 977 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
TRA2B-213ENST00000485530 PRPHP41219 470 aa13.76□□□□□ -0.21
TRA2B-213ENST00000485530 PSEN2P49810 448 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms