RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 ANO7Q6IWH7 933 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 LRRC15Q8TF66 581 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 UBE2OQ9C0C9 1292 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 ARPP21Q9UBL0 812 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 LRWD1Q9UFC0 647 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 CFAP73A6NFT4 308 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 GSTA1P08263 222 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 TCP1P17987 556 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 DNAJC14Q6Y2X3 702 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 C7orf25Q9BPX7 421 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 NOC4LQ9BVI4 516 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 TRIM9Q9C026 710 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 ATP8A2Q9NTI2 1148 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 GPR75-ASB3A0A0A6YYF3 556 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 NQO1P15559 274 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 PPP2R2AP63151 447 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 ADAM9Q13443 819 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 CASKIN2Q8WXE0 1202 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 MMADHCQ9H3L0 296 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 PCDHA6Q9UN73 950 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 ASB3Q9Y575 518 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 PCDHA8Q9Y5H6 950 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 ABCB11O95342 1321 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 NCK2O43639 380 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 PDHA1P08559 390 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 ATP2A2P16615 1042 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 ALDH3A1P30838 453 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 MS4A14Q96JA4 679 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 HYOU1Q9Y4L1 999 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
SEC61A1-205ENST00000483956 CAMTA2O94983 1202 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 PAEPP09466 180 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 POLE2P56282 527 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 CAVIN4Q5BKX8 364 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.394e-6■□□□□ 10.4
SEC61A1-205ENST00000483956 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 SIK3Q9Y2K2 1263 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 PJA2O43164 708 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 MOCS3O95396 460 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 NPTXRO95502 500 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 PLCG1P19174 1290 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 GNAQP50148 359 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 PDE4DQ08499 809 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 GRM4Q14833 912 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 DGKHQ86XP1 1220 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 SYCP3Q8IZU3 236 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 TEX9Q8N6V9 391 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 RASGRP4Q8TDF6 673 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 PCMTD1Q96MG8 357 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 DNAAF2Q9NVR5 837 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 ARHGAP20Q9P2F6 1191 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 ADAMTS2O95450 1211 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 CNGA1P29973 690 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 PAFAH1B1P43034 410 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 KIF11P52732 1056 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 EVX2Q03828 476 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 STK4Q13043 487 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 KRT26Q7Z3Y9 468 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 CABP7Q86V35 215 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 CHMP6Q96FZ7 201 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 NOVA2Q9UNW9 492 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-205ENST00000483956 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 ZNF844Q08AG5 666 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 INF2Q27J81 1249 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 CENPPQ6IPU0 288 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 CNNM4Q6P4Q7 775 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 KIF2BQ8N4N8 673 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 H0YGN5 161 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.398e-7■■□□□ 14.3
SEC61A1-205ENST00000483956 PLEKP08567 350 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 HSD17B3P37058 310 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms