RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TSHZ1Q6ZSZ6 1077 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 MCF2L2Q86YR7 1114 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 C2CD5Q86YS7 1000 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 TMTC2Q8N394 836 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 TTLL6Q8N841 843 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 SYTL5Q8TDW5 730 aaPredicted RBP8.23□□□□□ -1.09
CLK1-212ENST00000482590 TEX13AQ9BXU3 409 aaPredicted RBP8.23□□□□□ -1.09
CLK1-212ENST00000482590 MAF1Q9H063 256 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 TMX1Q9H3N1 280 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 GEMIN8Q9NWZ8 242 aaKnown RBP8.23□□□□□ -1.09
CLK1-212ENST00000482590 VTI1BQ9UEU0 232 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 MBD1Q9UIS9 605 aaPredicted RBP8.23□□□□□ -1.09
CLK1-212ENST00000482590 TRIM13O60858 407 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 PRKAR2BP31323 418 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
CLK1-212ENST00000482590 IL6STP40189 918 aaPredicted RBP8.22□□□□□ -1.09
CLK1-212ENST00000482590 EIF5P55010 431 aaKnown RBP8.22□□□□□ -1.09
CLK1-212ENST00000482590 RHBDL3P58872 404 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 FAM160A1Q05DH4 1040 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 FSTL1Q12841 308 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 C4orf46Q504U0 113 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 FBXO27Q8NI29 283 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 ZNF496Q96IT1 587 aaPredicted RBP8.22□□□□□ -1.09
CLK1-212ENST00000482590 NUDCQ9Y266 331 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 PRKAB1Q9Y478 270 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
CLK1-212ENST00000482590 RFXAPO00287 272 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 RGS13O14921 159 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 NRDCO43847 1150 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 SH3BP5O60239 455 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 FGRP09769 529 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 GBP1P32455 592 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 ST5P78524 1137 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 SRSF3P84103 164 aaKnown RBP8.21□□□□□ -1.1
CLK1-212ENST00000482590 TBC1D9BQ66K14 1250 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 VPS37DQ86XT2 251 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 FMNL3Q8IVF7 1028 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 SMC1BQ8NDV3 1235 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 PANK1Q8TE04 598 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 ZNF622Q969S3 477 aaKnown RBP eCLIP8.21□□□□□ -1.12e-16■■■■□ 20.9
CLK1-212ENST00000482590 CRELD1Q96HD1 420 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 MAP6Q96JE9 813 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 RSRP1Q9BUV0 290 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 FOXP3Q9BZS1 431 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
CLK1-212ENST00000482590 ZMYM5Q9UJ78 669 aa8.21□□□□□ -1.1
CLK1-212ENST00000482590 DDX41Q9UJV9 622 aaKnown RBP8.21□□□□□ -1.1
CLK1-212ENST00000482590 TMEM82A0PJX8 343 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 HRKO00198 91 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 FOXD2O60548 495 aaPredicted RBP8.2□□□□□ -1.1
CLK1-212ENST00000482590 UBOX5O94941 541 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 PI3P19957 117 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 PTMSP20962 102 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 MPP2Q14168 576 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 PLEKHG4Q58EX7 1191 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 PRR5LQ6MZQ0 368 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 REC114Q7Z4M0 266 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 TMC3Q7Z5M5 1100 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 ZNF654Q8IZM8 581 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 CNBD1Q8NA66 436 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 GOLM1Q8NBJ4 401 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 DAGLBQ8NCG7 672 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 IL17REQ8NFR9 667 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 RTF1Q92541 710 aaKnown RBP8.2□□□□□ -1.1
CLK1-212ENST00000482590 MKL1Q969V6 931 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 TCTN2Q96GX1 697 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 CRTAC1Q9NQ79 661 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 TYW1Q9NV66 732 aaKnown RBP8.2□□□□□ -1.1
CLK1-212ENST00000482590 LAMB2P55268 1798 aa8.2□□□□□ -1.1
CLK1-212ENST00000482590 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 PPP1R12AO14974 1030 aaPredicted RBP8.19□□□□□ -1.1
CLK1-212ENST00000482590 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
CLK1-212ENST00000482590 GARTP22102 1010 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 PAX3P23760 479 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 KIR2DL1P43626 348 aaPredicted RBP8.19□□□□□ -1.1
CLK1-212ENST00000482590 KIR2DL2P43627 348 aaPredicted RBP8.19□□□□□ -1.1
CLK1-212ENST00000482590 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLK1-212ENST00000482590 BIRC2Q13490 618 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 SLC14A2Q15849 920 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 SNAP47Q5SQN1 464 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 ZFYVE27Q5T4F4 411 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 TMEM151BQ8IW70 566 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 GPATCH11Q8N954 259 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 HHIPL1Q96JK4 782 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 CCDC136Q96JN2 1154 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 SIGLEC10Q96LC7 697 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 TCFL5Q9UL49 500 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 ZNF652Q9Y2D9 606 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 IRAK3Q9Y616 596 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 PCNTO95613 3336 aa8.19□□□□□ -1.1
CLK1-212ENST00000482590 TRPM7Q96QT4 1865 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 SLC22A31A6NKX4 558 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 MINDY4BA8MYZ0 360 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 PRC1O43663 620 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 A1BGP04217 495 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 PDGFRBP09619 1106 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 VEGFAP15692 232 aaPredicted RBP8.18□□□□□ -1.1
CLK1-212ENST00000482590 EPHB3P54753 998 aa8.18□□□□□ -1.1
CLK1-212ENST00000482590 CHMP4BP1P59074 171 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms