RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 WASF1Q92558 559 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 PHF20Q9BVI0 1012 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 C22orf23Q9BZE7 217 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 INSRRP14616 1297 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 FOSBP53539 338 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 MBTPS1Q14703 1052 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 PLCB4Q15147 1175 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 NONOQ15233 471 aaKnown RBP eCLIP18.77■□□□□ 0.6
VAMP4-204ENST00000482519 NPY5RQ15761 445 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 FAM160B1Q5W0V3 765 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 SWSAP1Q6NVH7 229 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 TRAF7Q6Q0C0 670 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 ABHD15Q6UXT9 468 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 RUFY4Q6ZNE9 571 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 PLPPR4Q7Z2D5 763 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.6
VAMP4-204ENST00000482519 ZBTB10Q96DT7 871 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 GUCD1Q96NT3 240 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 TUBE1Q9UJT0 475 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 SAMM50Q9Y512 469 aa18.77■□□□□ 0.6
VAMP4-204ENST00000482519 GBF1Q92538 1859 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 CCDC194A0A1B0GVG4 234 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 POTEB3A0JP26 581 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 M0R2N6 131 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 MSH4O15457 936 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 EDIL3O43854 480 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 ATG7O95352 703 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 FDPSP14324 419 aaKnown RBP18.76■□□□□ 0.59
VAMP4-204ENST00000482519 KCNJ6P48051 423 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 ADAM17P78536 824 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 RAB30Q15771 203 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 INF2Q27J81 1249 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 CNKSR3Q6P9H4 555 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 POTEBQ6S5H4 581 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 TRMT1LQ7Z2T5 733 aaKnown RBP18.76■□□□□ 0.59
VAMP4-204ENST00000482519 KRT25Q7Z3Z0 450 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 TNPO1Q92973 898 aaKnown RBP18.76■□□□□ 0.59
VAMP4-204ENST00000482519 GJA10Q969M2 543 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 LENG9Q96B70 501 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 CDX2Q99626 313 aaPredicted RBP18.76■□□□□ 0.59
VAMP4-204ENST00000482519 NKX2-4Q9H2Z4 354 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 ZNF576Q9H609 170 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 ZNF302Q9NR11 478 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 LIMCH1Q9UPQ0 1083 aa18.76■□□□□ 0.59
VAMP4-204ENST00000482519 RRN3P2A6NIE6 340 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 CHMP2AO43633 222 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 JAK2O60674 1132 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 BAIAP3O94812 1187 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 TDP2O95551 362 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 CXCL10P02778 98 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 MYOGP15173 224 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 KRT76Q01546 638 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 TCTN1Q2MV58 587 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 ZNF746Q6NUN9 644 aaPredicted RBP18.75■□□□□ 0.59
VAMP4-204ENST00000482519 PDXDC2PQ6P474 469 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 CCDC60Q8IWA6 550 aaPredicted RBP18.75■□□□□ 0.59
VAMP4-204ENST00000482519 CKAP2LQ8IYA6 745 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 OXER1Q8TDS5 423 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 TRAPPC12Q8WVT3 735 aa18.75■□□□□ 0.59
VAMP4-204ENST00000482519 FAM49AQ9H0Q0 323 aaPredicted RBP18.75■□□□□ 0.59
VAMP4-204ENST00000482519 YBX2Q9Y2T7 364 aaKnown RBP18.75■□□□□ 0.59
VAMP4-204ENST00000482519 GAS7O60861 476 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 CAND2O75155 1236 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 PSAPP07602 524 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 SLC26A2P50443 739 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 IKBKEQ14164 716 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 LETM2Q2VYF4 491 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 MARCH8Q5T0T0 291 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 TAF2Q6P1X5 1199 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 PIK3AP1Q6ZUJ8 805 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 RSPH3Q86UC2 560 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 SMAP1Q8IYB5 467 aaPredicted RBP18.74■□□□□ 0.59
VAMP4-204ENST00000482519 NSUN7Q8NE18 718 aaKnown RBP18.74■□□□□ 0.59
VAMP4-204ENST00000482519 DNAJB3Q8WWF6 145 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 SLC28A3Q9HAS3 691 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 STXBP5LQ9Y2K9 1186 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 PCDHA10Q9Y5I2 948 aa18.74■□□□□ 0.59
VAMP4-204ENST00000482519 TMEM265A0A087WTH1 108 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 WDR5P61964 334 aaKnown RBP18.73■□□□□ 0.59
VAMP4-204ENST00000482519 TRIM29Q14134 588 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 GRIN2CQ14957 1233 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 Q4G0T1 1027 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 LRCH2Q5VUJ6 765 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 TMCO2Q7Z6W1 182 aaPredicted RBP18.73■□□□□ 0.59
VAMP4-204ENST00000482519 CCDC83Q8IWF9 413 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 DBF4BQ8NFT6 615 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 MYLIPQ8WY64 445 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 SLC5A5Q92911 643 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 KIF2CQ99661 725 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 OSBPL7Q9BZF2 842 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 BRMS1Q9HCU9 246 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 GABBR1Q9UBS5 961 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 DDX25Q9UHL0 483 aaKnown RBP18.73■□□□□ 0.59
VAMP4-204ENST00000482519 PCDHA11Q9Y5I1 949 aa18.73■□□□□ 0.59
VAMP4-204ENST00000482519 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
VAMP4-204ENST00000482519 ABHD14A-ACY1A0A1B0GW23 586 aa18.72■□□□□ 0.59
VAMP4-204ENST00000482519 MBLAC1A4D2B0 266 aaPredicted RBP18.72■□□□□ 0.59
VAMP4-204ENST00000482519 WDR64B1ANS9 1081 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms