RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 DTNBO60941 627 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 GHRP10912 638 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 ADAM17P78536 824 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 NTRK3Q16288 839 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 PLA2G4DQ86XP0 818 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 CCDC12Q8WUD4 166 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-212ENST00000482251 RNF26Q9BY78 433 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-212ENST00000482251 ZMYND12Q9H0C1 365 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 FAM49AQ9H0Q0 323 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-212ENST00000482251 GLT8D2Q9H1C3 349 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 SMARCAD1Q9H4L7 1026 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 AZI2Q9H6S1 392 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 KAT6AQ92794 2004 aa11.93□□□□□ -0.5
CPSF4-212ENST00000482251 NFASCO94856 1347 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 ESYT2A0FGR8 921 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 BACH1O14867 736 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 MAFGO15525 162 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 GJB5O95377 273 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 CCNE2O96020 404 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 TMEM62Q0P6H9 643 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 PLEKHG4Q58EX7 1191 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 TRMT1LQ7Z2T5 733 aaKnown RBP11.92□□□□□ -0.5
CPSF4-212ENST00000482251 FBXL16Q8N461 479 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 CCDC148Q8NFR7 591 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 GDPD5Q8WTR4 605 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 DNAJB3Q8WWF6 145 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 SEPT8Q92599 483 aa11.92□□□□□ -0.5
CPSF4-212ENST00000482251 IGLV3-22A0A075B6J6 115 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 MEIS1O00470 390 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 CPLX1O14810 134 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 EFCAB14O75071 495 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 CAND2O75155 1236 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 UPP2O95045 317 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 CHRNA1P02708 482 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 AMHP03971 560 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 INSRRP14616 1297 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 IFNAR1P17181 557 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
CPSF4-212ENST00000482251 PRR16Q569H4 304 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 TAF2Q6P1X5 1199 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 CCDC60Q8IWA6 550 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-212ENST00000482251 CRYGNQ8WXF5 182 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 ZNF577Q9BSK1 485 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 IFIH1Q9BYX4 1025 aaKnown RBP11.91□□□□□ -0.5
CPSF4-212ENST00000482251 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 REV3LO60673 3130 aa11.91□□□□□ -0.5
CPSF4-212ENST00000482251 IPO5O00410 1097 aaKnown RBP11.9□□□□□ -0.5
CPSF4-212ENST00000482251 GNA11P29992 359 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 STAT5BP51692 787 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 EVCP57679 992 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 NLRP5P59047 1200 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 SETQ01105 290 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-212ENST00000482251 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
CPSF4-212ENST00000482251 MGAT3Q09327 533 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 GRB10Q13322 594 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-212ENST00000482251 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 RAD9AQ99638 391 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 CDY2AQ9Y6F7 541 aa11.9□□□□□ -0.5
CPSF4-212ENST00000482251 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 MBLAC1A4D2B0 266 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 DHX15O43143 795 aaKnown RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 EPB41L2O43491 1005 aaKnown RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 CYP3A4P08684 503 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 IBSPP21815 317 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 MRPS6P82932 125 aaKnown RBP11.89□□□□□ -0.51
CPSF4-212ENST00000482251 LPIN1Q14693 890 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 FAM26DQ5JW98 314 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 RSPH3Q86UC2 560 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 BICD2Q8TD16 824 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 GJA10Q969M2 543 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 PPP1R16BQ96T49 567 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 TM6SF1Q9BZW5 370 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 ZNF302Q9NR11 478 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
CPSF4-212ENST00000482251 PRRC2BQ5JSZ5 2229 aaKnown RBP11.88□□□□□ -0.51
CPSF4-212ENST00000482251 RRN3P2A6NIE6 340 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 CHMP2AO43633 222 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 CD52P31358 61 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 SCRN1Q12765 414 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 FBXO47Q5MNV8 452 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 SWSAP1Q6NVH7 229 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 ABHD15Q6UXT9 468 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms