RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CBX4O00257 560 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 NKRFO15226 690 aaKnown RBP eCLIP5.34□□□□□ -1.55
CBX3-207ENST00000481300 ZBTB7AO95365 584 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 ANAPC15P60006 121 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 LACTBP83111 547 aaPredicted RBP5.34□□□□□ -1.55
CBX3-207ENST00000481300 SLC9A5Q14940 896 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 RTP5Q14D33 572 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 ARHGAP44Q17R89 818 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 EMC4Q5J8M3 183 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 CYP4F22Q6NT55 531 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 OVCH1Q7RTY7 1134 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 PRRT2Q7Z6L0 340 aaPredicted RBP5.34□□□□□ -1.55
CBX3-207ENST00000481300 PTRH1Q86Y79 214 aaKnown RBP5.34□□□□□ -1.55
CBX3-207ENST00000481300 KIF18BQ86Y91 864 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 TRIM48Q8IWZ4 208 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 NLGN4XQ8N0W4 816 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 OR2W6PQ8NHA6 318 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 SMARCC2Q8TAQ2 1214 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 UHMK1Q8TAS1 419 aaKnown RBP5.34□□□□□ -1.55
CBX3-207ENST00000481300 PHOSPHO1Q8TCT1 267 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 CPA5Q8WXQ8 436 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 PALD1Q9ULE6 856 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 JAG2Q9Y219 1238 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 ZNF652Q9Y2D9 606 aa5.34□□□□□ -1.55
CBX3-207ENST00000481300 SLC12A8A0AV02 714 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 PTPDC1A2A3K4 754 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 FAM83GA6ND36 823 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 ZNF561-AS1K7EIQ3 104 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 SLC27A2O14975 620 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 SGSM2O43147 1006 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 HIP1RO75146 1068 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 JAM2P57087 298 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 STRN3Q13033 797 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 HABP4Q5JVS0 413 aaKnown RBP5.33□□□□□ -1.56
CBX3-207ENST00000481300 NT5DC1Q5TFE4 455 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 USP7Q93009 1102 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 ORAI3Q9BRQ5 295 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 YIPF4Q9BSR8 244 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 BDH2Q9BUT1 245 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 BRINP2Q9C0B6 783 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 PCDH12Q9NPG4 1184 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 SPATA6Q9NWH7 488 aaPredicted RBP5.33□□□□□ -1.56
CBX3-207ENST00000481300 B4GALT6Q9UBX8 382 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 MCM8Q9UJA3 840 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 SRPK3Q9UPE1 567 aa5.33□□□□□ -1.56
CBX3-207ENST00000481300 NOP58Q9Y2X3 529 aaKnown RBP5.33□□□□□ -1.56
CBX3-207ENST00000481300 KCNK3O14649 394 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 TADA3O75528 432 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 KRT37O76014 449 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 F2P00734 622 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 AMY2AP04746 511 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 AMY2BP19961 511 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 IL2P60568 153 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 IGBP1P78318 339 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 CACNB2Q08289 660 aaPredicted RBP5.32□□□□□ -1.56
CBX3-207ENST00000481300 DHCR24Q15392 516 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 SEPT7Q16181 437 aaKnown RBP5.32□□□□□ -1.56
CBX3-207ENST00000481300 FIGNQ5HY92 759 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 ZFYVE27Q5T4F4 411 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 ERICH6BQ5W0A0 696 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 KCTD1Q719H9 257 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.32□□□□□ -1.56
CBX3-207ENST00000481300 CARFQ8N187 725 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 NXPE1Q8N323 547 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 ATL2Q8NHH9 583 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 GPATCH3Q96I76 525 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 TTC1Q99614 292 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 CD244Q9BZW8 370 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 SMURF1Q9HCE7 757 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 ATP23Q9Y6H3 246 aa5.32□□□□□ -1.56
CBX3-207ENST00000481300 TCRBV5S4A2TA0A5A2 114 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 ZNF891A8MT65 544 aaPredicted RBP5.31□□□□□ -1.56
CBX3-207ENST00000481300 H7C1D1 291 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 TRAF5O00463 557 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 PPM1GO15355 546 aaPredicted RBP5.31□□□□□ -1.56
CBX3-207ENST00000481300 NOBOXO60393 691 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 C8BP07358 591 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 MECP2P51608 486 aaKnown RBP5.31□□□□□ -1.56
CBX3-207ENST00000481300 IRF9Q00978 393 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 AMPD3Q01432 767 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 OCRLQ01968 901 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 EFEMP1Q12805 493 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 TUSC3Q13454 348 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 ZNF174Q15697 407 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 HHIPL2Q6UWX4 724 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 C11orf74Q86VG3 221 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 ANKRD13AQ8IZ07 590 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 AFAP1L2Q8N4X5 818 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 SYT3Q9BQG1 590 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 PCIF1Q9H4Z3 704 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 ASH2LQ9UBL3 628 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 ATP8A1Q9Y2Q0 1164 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 DUSP10Q9Y6W6 482 aa5.31□□□□□ -1.56
CBX3-207ENST00000481300 TCRBV5S2A0A599 114 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 MAN2B1O00754 1011 aa5.3□□□□□ -1.56
CBX3-207ENST00000481300 SCDO00767 359 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms