RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 STRIP1Q5VSL9 837 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 TTLL5Q6EMB2 1281 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 ZNF804AQ7Z570 1209 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 ANKRD44Q8N8A2 993 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 PUS3Q9BZE2 481 aaKnown RBP7.64□□□□□ -1.19
VPS50-215ENST00000480943 CD209Q9NNX6 404 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 VTI1BQ9UEU0 232 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 SCAF8Q9UPN6 1271 aaKnown RBP7.64□□□□□ -1.19
VPS50-215ENST00000480943 PITPNM2Q9BZ72 1349 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 MYH2Q9UKX2 1941 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 IGF2BP3O00425 579 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-215ENST00000480943 SASH1O94885 1247 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 CT47B1P0C2W7 299 aaPredicted RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 TFE3P19532 575 aaPredicted RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 GRK4P32298 578 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 HUNKP57058 714 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 TAGLNQ01995 201 aaKnown RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-215ENST00000480943 SKOR2Q2VWA4 1001 aaPredicted RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 NBPF9Q3BBW0 867 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 RABL6Q3YEC7 729 aaPredicted RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 FAM214BQ7L5A3 538 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 SAPCD2Q86UD0 394 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 HID1Q8IV36 788 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 KLHDC4Q8TBB5 520 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 CDCA5Q96FF9 252 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 KCNC2Q96PR1 638 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 FOXQ1Q9C009 403 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 USP44Q9H0E7 712 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 GBA2Q9HCG7 927 aaPredicted RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 PRDM5Q9NQX1 630 aaPredicted RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 NOB1Q9ULX3 412 aaKnown RBP7.63□□□□□ -1.19
VPS50-215ENST00000480943 TLR6Q9Y2C9 796 aa7.63□□□□□ -1.19
VPS50-215ENST00000480943 MROH5Q6ZUA9 1318 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 KIF16BQ96L93 1317 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 F8W031 263 aaPredicted RBP7.62□□□□□ -1.19
VPS50-215ENST00000480943 EOMESO95936 686 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 SRFP11831 508 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 GYG1P46976 350 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 RARSP54136 660 aaKnown RBP7.62□□□□□ -1.19
VPS50-215ENST00000480943 NKG7Q16617 165 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 LRRC24Q50LG9 513 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 C15orf52Q6ZUT6 534 aaKnown RBP7.62□□□□□ -1.19
VPS50-215ENST00000480943 CERS5Q8N5B7 392 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 C2orf69Q8N8R5 385 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 CCDC120Q96HB5 630 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 MIPEPQ99797 713 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 API5Q9BZZ5 524 aaKnown RBP7.62□□□□□ -1.19
VPS50-215ENST00000480943 HDAC9Q9UKV0 1011 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 MAPK8IP1Q9UQF2 711 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
VPS50-215ENST00000480943 MYO5AQ9Y4I1 1855 aaKnown RBP7.62□□□□□ -1.19
VPS50-215ENST00000480943 GFRA2O00451 464 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 WNT10BO00744 389 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 SLITRK5O94991 958 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 UBTFL1P0CB47 393 aaPredicted RBP7.61□□□□□ -1.19
VPS50-215ENST00000480943 IL1R1P14778 569 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 CAP2P40123 477 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 CTCFP49711 727 aaPredicted RBP7.61□□□□□ -1.19
VPS50-215ENST00000480943 MAP2K1Q02750 393 aaPredicted RBP7.61□□□□□ -1.19
VPS50-215ENST00000480943 UBE4AQ14139 1066 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 TSNAXIP1Q2TAA8 658 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 METTL24Q5JXM2 366 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 MFSD2AQ8NA29 543 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 HHIPL1Q96JK4 782 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 RIPOR2Q9Y4F9 1068 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 PCDHAC2Q9Y5I4 1007 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 DOCK2Q92608 1830 aa7.61□□□□□ -1.19
VPS50-215ENST00000480943 HSPA8P11142 646 aaKnown RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 HIBADHP31937 336 aaKnown RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 RFX5P48382 616 aaPredicted RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 LBX1P52954 281 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 RPL6Q02878 288 aaKnown RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 DLGAP5Q15398 846 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 PRAMEF18Q5VWM3 479 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 PRAMEF13Q5VWM6 474 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 RGMBQ6NW40 437 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 PHC3Q8NDX5 983 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 SIL1Q9H173 461 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 TPX2Q9ULW0 747 aaKnown RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 TNNQ9UQP3 1299 aa7.6□□□□□ -1.19
VPS50-215ENST00000480943 LRRFIP2Q9Y608 721 aaKnown RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 COL1A1P02452 1464 aaPredicted RBP7.6□□□□□ -1.19
VPS50-215ENST00000480943 FAM205AQ6ZU69 1335 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 EYA2O00167 538 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 BCAR3O75815 825 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 PGRP06401 933 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 MAP2K2P36507 400 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 GDNFP39905 211 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 MMP14P50281 582 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 RBM5P52756 815 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS50-215ENST00000480943 FKBP1AP62942 108 aaKnown RBP7.59□□□□□ -1.19
VPS50-215ENST00000480943 PDE4BQ07343 736 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 CHAF1AQ13111 956 aaPredicted RBP7.59□□□□□ -1.19
VPS50-215ENST00000480943 CFAP100Q494V2 611 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 MFSD14BQ5SR56 506 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 MOB2Q70IA6 237 aa7.59□□□□□ -1.19
VPS50-215ENST00000480943 VPS37DQ86XT2 251 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms