RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 ZCWPW2Q504Y3 356 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 PRPF38AQ8NAV1 312 aaKnown RBP18.55■□□□□ 0.56
SH3D21-203ENST00000480549 CCPG1Q9ULG6 757 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
SH3D21-203ENST00000480549 MEIS1O00470 390 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 FANCGO15287 622 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 CACNB1Q02641 598 aaPredicted RBP18.55■□□□□ 0.56
SH3D21-203ENST00000480549 LRRC55Q6ZSA7 311 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 SLC5A5Q92911 643 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 POLR3CQ9BUI4 534 aaPredicted RBP18.55■□□□□ 0.56
SH3D21-203ENST00000480549 PITPNM2Q9BZ72 1349 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 PHIPQ8WWQ0 1821 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 PSMD10O75832 226 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 SLC30A10Q6XR72 485 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 OTOP1Q7RTM1 612 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 CCDC65Q8IXS2 484 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 MYOCDQ8IZQ8 938 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 SYT2Q8N9I0 419 aaPredicted RBP18.54■□□□□ 0.56
SH3D21-203ENST00000480549 CLEC4DQ8WXI8 215 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 SCP2P22307 547 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 ERVK-24P63145 666 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 TADA2BQ86TJ2 420 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 EIF2AK1Q9BQI3 630 aaKnown RBP18.54■□□□□ 0.56
SH3D21-203ENST00000480549 PDE11AQ9HCR9 933 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 EFCAB8A8MWE9 144 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 MTIF2P46199 727 aaKnown RBP18.54■□□□□ 0.56
SH3D21-203ENST00000480549 HOOK2Q96ED9 719 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 TTYH3Q9C0H2 523 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 EHMT1Q9H9B1 1298 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 DNM3Q9UQ16 869 aa18.54■□□□□ 0.56
SH3D21-203ENST00000480549 PHLPP2Q6ZVD8 1323 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 RASSF10A6NK89 507 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 GHRHRQ02643 423 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.56
SH3D21-203ENST00000480549 PPP2R5CQ13362 524 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 CEP55Q53EZ4 464 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 EMILIN3Q9NT22 766 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 COL20A1Q9P218 1284 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 ADGRG1Q9Y653 693 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 RLFQ13129 1914 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 RPTORQ8N122 1335 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 PES1O00541 588 aaKnown RBP18.53■□□□□ 0.56
SH3D21-203ENST00000480549 NFIBO00712 420 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 KRT9P35527 623 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 CYP4A11Q02928 519 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 MTMR2Q13614 643 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 GIT2Q14161 759 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 EFCAB13Q8IY85 973 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
SH3D21-203ENST00000480549 MRPL44Q9H9J2 332 aaKnown RBP18.53■□□□□ 0.56
SH3D21-203ENST00000480549 SLC38A10Q9HBR0 1119 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 TBC1D7Q9P0N9 293 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 ZNF112Q9UJU3 913 aa18.53■□□□□ 0.56
SH3D21-203ENST00000480549 GOLGA6L9A6NEM1 432 aa18.52■□□□□ 0.56
SH3D21-203ENST00000480549 VCAM1P19320 739 aa18.52■□□□□ 0.56
SH3D21-203ENST00000480549 HSD17B14Q9BPX1 270 aa18.52■□□□□ 0.56
SH3D21-203ENST00000480549 RGL1Q9NZL6 768 aa18.52■□□□□ 0.56
SH3D21-203ENST00000480549 PARD6BQ9BYG5 372 aa18.52■□□□□ 0.56
SH3D21-203ENST00000480549 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.56
SH3D21-203ENST00000480549 KLK7P49862 253 aa18.52■□□□□ 0.55
SH3D21-203ENST00000480549 MAP2K1Q02750 393 aaPredicted RBP18.52■□□□□ 0.55
SH3D21-203ENST00000480549 TBC1D8BQ0IIM8 1120 aa18.52■□□□□ 0.55
SH3D21-203ENST00000480549 LONRF2Q1L5Z9 754 aa18.52■□□□□ 0.55
SH3D21-203ENST00000480549 HERC4Q5GLZ8 1057 aaPredicted RBP18.52■□□□□ 0.55
SH3D21-203ENST00000480549 TMTC1Q8IUR5 882 aa18.52■□□□□ 0.55
SH3D21-203ENST00000480549 SCFD1Q8WVM8 642 aa18.52■□□□□ 0.55
SH3D21-203ENST00000480549 ERGIC2Q96RQ1 377 aa18.52■□□□□ 0.55
SH3D21-203ENST00000480549 N4BP1O75113 896 aaKnown RBP18.51■□□□□ 0.55
SH3D21-203ENST00000480549 CCDC175P0C221 793 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 ARP10275 920 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 ANGEL2Q5VTE6 544 aaKnown RBP18.51■□□□□ 0.55
SH3D21-203ENST00000480549 TRPM4Q8TD43 1214 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 DNAJC7Q99615 494 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 TANGO6Q9C0B7 1094 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 FAN1Q9Y2M0 1017 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 COL11A1P12107 1806 aaPredicted RBP18.51■□□□□ 0.55
SH3D21-203ENST00000480549 PHACTR2O75167 634 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 BIRC2Q13490 618 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 LRRC31Q6UY01 552 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 TSG101Q99816 390 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 REEP2Q9BRK0 252 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
SH3D21-203ENST00000480549 SLITRK3O94933 977 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 FGFR1OPO95684 399 aaKnown RBP18.5■□□□□ 0.55
SH3D21-203ENST00000480549 LIG3P49916 1009 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 SETQ01105 290 aaPredicted RBP18.5■□□□□ 0.55
SH3D21-203ENST00000480549 VWA3BQ502W6 1294 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 DCAF15Q66K64 600 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 B3GNT9Q6UX72 402 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 KCTD17Q8N5Z5 321 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 KCTD10Q9H3F6 313 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 RAVER2Q9HCJ3 691 aaKnown RBP18.5■□□□□ 0.55
SH3D21-203ENST00000480549 TUFT1Q9NNX1 390 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 EYA4O95677 639 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 KRT18P05783 430 aaKnown RBP18.5■□□□□ 0.55
SH3D21-203ENST00000480549 CYP26C1Q6V0L0 522 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
SH3D21-203ENST00000480549 SBF1O95248 1867 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms