RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 MICALCLQ6ZW33 695 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 ADGRF4Q8IZF3 695 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 FAM133AQ8N9E0 248 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 EIF1ADQ8N9N8 165 aaKnown RBP9.53□□□□□ -0.88
PKP4-210ENST00000480171 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 C1orf131Q8NDD1 294 aaKnown RBP9.53□□□□□ -0.88
PKP4-210ENST00000480171 HAS1Q92839 578 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
PKP4-210ENST00000480171 PBKQ96KB5 322 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 GPR101Q96P66 508 aaPredicted RBP9.53□□□□□ -0.88
PKP4-210ENST00000480171 SPAG5Q96R06 1193 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 JMJD4Q9H9V9 463 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 SWAP70Q9UH65 585 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 GAKO14976 1311 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 CDK5RAP2Q96SN8 1893 aa9.53□□□□□ -0.88
PKP4-210ENST00000480171 A0A087X0T9 212 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 EDIL3O43854 480 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 FAM228BP0C875 321 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 RFC4P35249 363 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 CLK2P49760 499 aaKnown RBP9.52□□□□□ -0.88
PKP4-210ENST00000480171 ZNF543Q08ER8 600 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.88
PKP4-210ENST00000480171 DPP8Q6V1X1 898 aaPredicted RBP9.52□□□□□ -0.88
PKP4-210ENST00000480171 USP38Q8NB14 1042 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 ADAMTS1Q9UHI8 967 aa9.52□□□□□ -0.88
PKP4-210ENST00000480171 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 E9PMD0 336 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 INPP5BP32019 993 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 GUCY2FP51841 1108 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 KCNH2Q12809 1159 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 PDCLQ13371 301 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 TTC19Q6DKK2 380 aaPredicted RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 VPS36Q86VN1 386 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ARFGAP2Q8N6H7 521 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 LMBR1Q8WVP7 490 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 CASKIN2Q8WXE0 1202 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 INPP4AQ96PE3 977 aaPredicted RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 GANQ9H2C0 597 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ZHX3Q9H4I2 956 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 CCNL1Q9UK58 526 aaPredicted RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 TNRC6CQ9HCJ0 1690 aaKnown RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 PITPNM2Q9BZ72 1349 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ESYT3A0FGR9 886 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 KCNK3O14649 394 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ZBTB5O15062 677 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 KRT14P02533 472 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 AKR1B1P15121 316 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ANXA13P27216 316 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 EIF6P56537 245 aaKnown RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 CUL1Q13616 776 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ICE2Q659A1 982 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 MAATS1Q7Z4T9 603 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 FRMD5Q7Z6J6 570 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ZC3H3Q8IXZ2 948 aaKnown RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 SCFD1Q8WVM8 642 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 KCTD10Q9H3F6 313 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 TAF1DQ9H5J8 278 aaPredicted RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 PLCB1Q9NQ66 1216 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 HDAC9Q9UKV0 1011 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
PKP4-210ENST00000480171 PCDHA2Q9Y5H9 948 aa9.52□□□□□ -0.89
PKP4-210ENST00000480171 ZEB2O60315 1214 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 FAM153BP0C7A2 387 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 NR1D1P20393 614 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 NR2F2P24468 414 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 PICALMQ13492 652 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 HLTFQ14527 1009 aaKnown RBP eCLIP9.51□□□□□ -0.89
PKP4-210ENST00000480171 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 FAM153CQ494X1 144 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ZFYVE27Q5T4F4 411 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 EMC10Q5UCC4 262 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 KLHL7Q8IXQ5 586 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 SLFN12Q8IYM2 578 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 SH2D3CQ8N5H7 860 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ERMNQ8TAM6 284 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 LRRC45Q96CN5 670 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ATP6V1G3Q96LB4 118 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 EHD4Q9H223 541 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ARMCX3Q9UH62 379 aaPredicted RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 FAM153AQ9UHL3 310 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 NHSQ6T4R5 1651 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 IGKV6D-41A0A0C4DH26 115 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 POTEB3A0JP26 581 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 ZNF233A6NK53 670 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 POTECB2RU33 542 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 RAD51CO43502 376 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 CALUO43852 315 aaPredicted RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 FLOT1O75955 427 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 AFPP02771 609 aaKnown RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 CYP11B2P19099 503 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 HSPA9P38646 679 aaKnown RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 USP8P40818 1118 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 LIG3P49916 1009 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 USP11P51784 963 aa9.51□□□□□ -0.89
PKP4-210ENST00000480171 RNASE9P60153 205 aaKnown RBP9.51□□□□□ -0.89
PKP4-210ENST00000480171 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms