RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ANGEL1Q9UNK9 670 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 H0YGN5 161 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 FZD9O00144 591 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 ABLIM1O14639 778 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 RAD17O75943 681 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 CNGA1P29973 690 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 MAP3K12Q12852 859 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 CUL3Q13618 768 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 ERICH1Q86X53 443 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 DIS3L2Q8IYB7 885 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 OR2W6PQ8NHA6 318 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 IFIH1Q9BYX4 1025 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 AGPAT5Q9NUQ2 364 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 VPS54Q9P1Q0 977 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 NOVA2Q9UNW9 492 aaKnown RBP11.88□□□□□ -0.51
CHD6-208ENST00000480022 NFS1Q9Y697 457 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
CHD6-208ENST00000480022 NCK2O43639 380 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 NPTXRO95502 500 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 TRIM21P19474 475 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 CTNNA1P35221 906 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 ALDH5A1P51649 535 aaPredicted RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 ZBED6P86452 979 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 LRRC23Q53EV4 343 aaPredicted RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 FAM133BQ5BKY9 247 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 LRRC45Q96CN5 670 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 CNOT10Q9H9A5 744 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 H7C1D1 291 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 ZNF263O14978 683 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 RANBP6O60518 1105 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 MMP1P03956 469 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 KCNJ2P63252 427 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 CXCL9Q07325 125 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 PPP1R15BQ5SWA1 713 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 STRIP1Q5VSL9 837 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 TRPM8Q7Z2W7 1104 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 RBM41Q96IZ5 413 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 MS4A14Q96JA4 679 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 MXD3Q9BW11 206 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 PCDHA13Q9Y5I0 950 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 ASAP2O43150 1006 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 UPP2O95045 317 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 FGAP02671 866 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 ALDH3A1P30838 453 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 MRPS35P82673 323 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 CDK17Q00537 523 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 NTRK3Q16288 839 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 DACT2Q5SW24 774 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 ERMARDQ5T6L9 678 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 NUGGCQ68CJ6 796 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 KRT26Q7Z3Y9 468 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 RBM12BQ8IXT5 1001 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 RETREG2Q8NC44 543 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 WDR66Q8TBY9 1149 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 WASF1Q92558 559 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 CENPTQ96BT3 561 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 FAM129AQ9BZQ8 928 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 TRIM4Q9C037 500 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 FOXP1Q9H334 677 aaPredicted RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 PIH1D3Q9NQM4 214 aaKnown RBP11.87□□□□□ -0.51
CHD6-208ENST00000480022 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
CHD6-208ENST00000480022 MYH13Q9UKX3 1938 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 GPR75-ASB3A0A0A6YYF3 556 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 EIF4E1BA6NMX2 242 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 DNM2P50570 870 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 MAGOHP61326 146 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 SSRP1Q08945 709 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 HLTFQ14527 1009 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■■□ 24.4
CHD6-208ENST00000480022 C1QTNF12Q5T7M4 302 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 SDCCAG8Q86SQ7 713 aaPredicted RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 LMNTD2Q8IXW0 634 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 MAGOHBQ96A72 148 aaKnown RBP11.86□□□□□ -0.51
CHD6-208ENST00000480022 KRT12Q99456 494 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 TLR10Q9BXR5 811 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 TTYH3Q9C0H2 523 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 WDR35Q9P2L0 1181 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 C2CD2Q9Y426 696 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 ASB3Q9Y575 518 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 MYH7P12883 1935 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 ZNF213O14771 459 aa11.86□□□□□ -0.51
CHD6-208ENST00000480022 CTNND1O60716 968 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1068.3 ms