RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TAP1Q03518 808 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
PRKN-207ENST00000479615 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
PRKN-207ENST00000479615 GALNT17Q6IS24 598 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 PHKBQ93100 1093 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 PGBD1Q96JS3 809 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 TELO2Q9Y4R8 837 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 SQORQ9Y6N5 450 aa17.12■□□□□ 0.33
PRKN-207ENST00000479615 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
PRKN-207ENST00000479615 CDKL5O76039 1030 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 DEXIO95424 95 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 INSRRP14616 1297 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 MARK3P27448 753 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
PRKN-207ENST00000479615 ITGB3BPQ13352 177 aaPredicted RBP17.11■□□□□ 0.33
PRKN-207ENST00000479615 ADGRE1Q14246 886 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 IER5Q5VY09 327 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 MIS18BP1Q6P0N0 1132 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 SMAP1Q8IYB5 467 aaPredicted RBP17.11■□□□□ 0.33
PRKN-207ENST00000479615 NME8Q8N427 588 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 ATXN2LQ8WWM7 1075 aaKnown RBP17.11■□□□□ 0.33
PRKN-207ENST00000479615 PDRG1Q9NUG6 133 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 TRPC6Q9Y210 931 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 CDH23Q9H251 3354 aa17.11■□□□□ 0.33
PRKN-207ENST00000479615 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 POTEB3A0JP26 581 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 M0QZ92 97 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 HBP1O60381 514 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
PRKN-207ENST00000479615 CTSHP09668 335 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 NLRP5P59047 1200 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 DEFB103AP81534 67 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 KRT76Q01546 638 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
PRKN-207ENST00000479615 ANKRD1Q15327 319 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
PRKN-207ENST00000479615 POTEBQ6S5H4 581 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 TOP1MTQ969P6 601 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 PCYT2Q99447 389 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
PRKN-207ENST00000479615 PCDHA2Q9Y5H9 948 aa17.1■□□□□ 0.33
PRKN-207ENST00000479615 BACH1O14867 736 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 MARCH8Q5T0T0 291 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 TGS1Q96RS0 853 aaKnown RBP17.09■□□□□ 0.33
PRKN-207ENST00000479615 TET1Q8NFU7 2136 aa17.09■□□□□ 0.33
PRKN-207ENST00000479615 COL1A2P08123 1366 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 DHX15O43143 795 aaKnown RBP17.08■□□□□ 0.32
PRKN-207ENST00000479615 CHRNA1P02708 482 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 XBP1P17861 261 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 ERVK-21P61565 698 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
PRKN-207ENST00000479615 MGAT3Q09327 533 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 DNAJB3Q8WWF6 145 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 FTHL17Q9BXU8 183 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.32
PRKN-207ENST00000479615 NCOA5Q9HCD5 579 aaKnown RBP17.08■□□□□ 0.32
PRKN-207ENST00000479615 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 VPS54Q9P1Q0 977 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 PCDHA4Q9UN74 947 aa17.08■□□□□ 0.32
PRKN-207ENST00000479615 CCNE2O96020 404 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 PSAPP07602 524 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 IGBP1P78318 339 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 MRPS6P82932 125 aaKnown RBP17.07■□□□□ 0.32
PRKN-207ENST00000479615 AAK1Q2M2I8 961 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 TCTN1Q2MV58 587 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 PRR16Q569H4 304 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 TJAP1Q5JTD0 557 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 ZNF484Q5JVG2 852 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRKN-207ENST00000479615 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 SP7Q8TDD2 431 aaPredicted RBP17.07■□□□□ 0.32
PRKN-207ENST00000479615 PPM1EQ8WY54 764 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 RIT2Q99578 217 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 CEP131Q9UPN4 1083 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
PRKN-207ENST00000479615 A0A0C4DFX4 3053 aa17.06■□□□□ 0.32
PRKN-207ENST00000479615 ODR4Q5SWX8 454 aa17.06■□□□□ 0.32
PRKN-207ENST00000479615 MTHFD1LQ6UB35 978 aa17.06■□□□□ 0.32
PRKN-207ENST00000479615 DAGLBQ8NCG7 672 aa17.06■□□□□ 0.32
PRKN-207ENST00000479615 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
PRKN-207ENST00000479615 FAM167AQ96KS9 214 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms