RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 CARFQ8N187 725 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 NXPE1Q8N323 547 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 RCBTB1Q8NDN9 531 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 PCDH19Q8TAB3 1148 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 RBM15Q96T37 977 aaKnown RBP eCLIP4.86□□□□□ -1.63
NF1-209ENST00000479536 SMAD5Q99717 465 aaKnown RBP4.86□□□□□ -1.63
NF1-209ENST00000479536 ALG1Q9BT22 464 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 TRIM8Q9BZR9 551 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 PUS7LQ9H0K6 701 aaKnown RBP4.86□□□□□ -1.63
NF1-209ENST00000479536 CCDC8Q9H0W5 538 aaPredicted RBP4.86□□□□□ -1.63
NF1-209ENST00000479536 SLC52A1Q9NWF4 448 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 PLA2G2DQ9UNK4 145 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 APOBEC2Q9Y235 224 aaKnown RBP4.86□□□□□ -1.63
NF1-209ENST00000479536 COQ6Q9Y2Z9 468 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 HCFC2Q9Y5Z7 792 aa4.86□□□□□ -1.63
NF1-209ENST00000479536 NPHP3-ACAD11A0A0J9YXS1 232 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 CKMP06732 381 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 SRGAP2CP0DJJ0 459 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 PYGMP11217 842 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 PAMP19021 973 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 FBLN1P23142 703 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 CEBPAP49715 358 aaPredicted RBP4.85□□□□□ -1.63
NF1-209ENST00000479536 NEK2P51955 445 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 IL2P60568 153 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 HTRA3P83110 453 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 DSG1Q02413 1049 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 KIZQ2M2Z5 673 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 SMC1BQ8NDV3 1235 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 COG1Q8WTW3 980 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 TSR2Q969E8 191 aaKnown RBP4.85□□□□□ -1.63
NF1-209ENST00000479536 CCDC136Q96JN2 1154 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 MMP19Q99542 508 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 AP5S1Q9NUS5 200 aa4.85□□□□□ -1.63
NF1-209ENST00000479536 TRBV23OR9-2A0A075B6M9 112 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 A0A1W2PQJ5 194 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 SHTN1A0MZ66 631 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 TRAF5O00463 557 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 WNT9AO14904 365 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 FGF10O15520 208 aaPredicted RBP4.84□□□□□ -1.63
NF1-209ENST00000479536 TSPAN6O43657 245 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 GAS7O60861 476 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 FKBP9O95302 570 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 SLPIP03973 132 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 DBHP09172 617 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 TACR2P21452 398 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 ADCYAP1R1P41586 468 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 MVKQ03426 396 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 PPP2R5AQ15172 486 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 INF2Q27J81 1249 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 TMEM177Q53S58 311 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 MBLAC2Q68D91 279 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 ZFPM1Q8IX07 1006 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 CNTD1Q8N815 330 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 C8orf48Q96LL4 319 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 SAMD11Q96NU1 681 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 C1QTNF3Q9BXJ4 246 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 CELF4Q9BZC1 486 aaKnown RBP4.84□□□□□ -1.63
NF1-209ENST00000479536 CABP5Q9NP86 173 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 GEMIN8Q9NWZ8 242 aaKnown RBP4.84□□□□□ -1.63
NF1-209ENST00000479536 GABBR1Q9UBS5 961 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 TRHDEQ9UKU6 1024 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 ZKSCAN5Q9Y2L8 839 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 PCDHA2Q9Y5H9 948 aa4.84□□□□□ -1.63
NF1-209ENST00000479536 ARID4BQ4LE39 1312 aaPredicted RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 CCDC194A0A1B0GVG4 234 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 GABRDO14764 452 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 AKAP10O43572 662 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 MAP4K4O95819 1239 aaPredicted RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 SOD2P04179 222 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 CYBBP04839 570 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 MC3RP41968 323 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 DNM2P50570 870 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 RAB27AP51159 221 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 MECP2P51608 486 aaKnown RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 TBX4P57082 545 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 DLX2Q07687 328 aaPredicted RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 LRRC41Q15345 812 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 FAM47CQ5HY64 1035 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 SYDE2Q5VT97 1194 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 PAQR3Q6TCH7 311 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 WDR75Q8IWA0 830 aaKnown RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 TTC9BQ8N6N2 239 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 CHST14Q8NCH0 376 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 TMEM52Q8NDY8 209 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 CHST13Q8NET6 341 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 FBXW5Q969U6 566 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 CHMP4CQ96CF2 233 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 PTCHD1Q96NR3 888 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 GPR101Q96P66 508 aaPredicted RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 YIPF4Q9BSR8 244 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 IPPKQ9H8X2 491 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 THG1LQ9NWX6 298 aaKnown RBP4.83□□□□□ -1.64
NF1-209ENST00000479536 B4GALT6Q9UBX8 382 aa4.83□□□□□ -1.64
NF1-209ENST00000479536 CCDC66A2RUB6 948 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 FAM47E-STBD1D6RA91 191 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 GSTA4O15217 222 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 PRC1O43663 620 aa4.82□□□□□ -1.64
NF1-209ENST00000479536 MYO1BO43795 1136 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms