RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 CYP46A1Q9Y6A2 500 aa23.25■■□□□ 1.31
TRIM8-203ENST00000479004 FAM86B1E9PN63 330 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 FAM86B2P0C5J1 330 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 GNA11P29992 359 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 ACTR2P61160 394 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 TAF2Q6P1X5 1199 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 PPM1EQ8WY54 764 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 ZBED2Q9BTP6 218 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 COL25A1Q9BXS0 654 aaPredicted RBP23.24■■□□□ 1.31
TRIM8-203ENST00000479004 SLC26A6Q9BXS9 759 aa23.24■■□□□ 1.31
TRIM8-203ENST00000479004 NCOA5Q9HCD5 579 aaKnown RBP23.24■■□□□ 1.31
TRIM8-203ENST00000479004 LCHNA4D1U4 455 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 MBLAC1A4D2B0 266 aaPredicted RBP23.23■■□□□ 1.31
TRIM8-203ENST00000479004 RFXAPO00287 272 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 ATG7O95352 703 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 MARCH8Q5T0T0 291 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 RUFY4Q6ZNE9 571 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 PLPPR4Q7Z2D5 763 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 REXO1Q8N1G1 1221 aaKnown RBP23.23■■□□□ 1.31
TRIM8-203ENST00000479004 SEPT8Q92599 483 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 RAD9AQ99638 391 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 AZI2Q9H6S1 392 aa23.23■■□□□ 1.31
TRIM8-203ENST00000479004 UPF2Q9HAU5 1272 aaKnown RBP23.23■■□□□ 1.31
TRIM8-203ENST00000479004 IGLV3-22A0A075B6J6 115 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 EPOPA6NHQ4 379 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 PPFIA3O75145 1194 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 CHRNA1P02708 482 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 PLA2G4DQ86XP0 818 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 ARNTL2Q8WYA1 636 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 BACH2Q9BYV9 841 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 TUBE1Q9UJT0 475 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 SIP14410 1827 aa23.22■■□□□ 1.31
TRIM8-203ENST00000479004 RRN3P2A6NIE6 340 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 AMHP03971 560 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 INSRRP14616 1297 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 POU3F3P20264 500 aaPredicted RBP23.21■■□□□ 1.31
TRIM8-203ENST00000479004 STAT5BP51692 787 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 MGAT3Q09327 533 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 CCDC85BQ15834 202 aaPredicted RBP23.21■■□□□ 1.31
TRIM8-203ENST00000479004 CCDC148Q8NFR7 591 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 BICD2Q8TD16 824 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 TNPO1Q92973 898 aaKnown RBP23.21■■□□□ 1.31
TRIM8-203ENST00000479004 ZNF274Q96GC6 653 aaPredicted RBP23.21■■□□□ 1.31
TRIM8-203ENST00000479004 PRDM6Q9NQX0 595 aa23.21■■□□□ 1.31
TRIM8-203ENST00000479004 IGKV6D-21A0A0A0MT36 114 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 DHX15O43143 795 aaKnown RBP23.2■■□□□ 1.3
TRIM8-203ENST00000479004 CCNE2O96020 404 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 ANAPC15P60006 121 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 IGBP1P78318 339 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 PLCB4Q15147 1175 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 SPRED2Q7Z698 418 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 APBB2Q92870 758 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 UPF3BQ9BZI7 483 aaKnown RBP23.2■■□□□ 1.3
TRIM8-203ENST00000479004 VPS54Q9P1Q0 977 aa23.2■■□□□ 1.3
TRIM8-203ENST00000479004 XIRP2A4UGR9 3374 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
TRIM8-203ENST00000479004 FAM117BQ6P1L5 589 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 ABHD15Q6UXT9 468 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 RSPH3Q86UC2 560 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 MYOCDQ8IZQ8 938 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 RASGRP4Q8TDF6 673 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 DNAJB3Q8WWF6 145 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 LARP6Q9BRS8 491 aaKnown RBP23.19■■□□□ 1.3
TRIM8-203ENST00000479004 SH3GLB2Q9NR46 395 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 TRPC6Q9Y210 931 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 MTCH2Q9Y6C9 303 aa23.19■■□□□ 1.3
TRIM8-203ENST00000479004 IPO5O00410 1097 aaKnown RBP23.18■■□□□ 1.3
TRIM8-203ENST00000479004 CIITAP33076 1130 aa23.18■■□□□ 1.3
TRIM8-203ENST00000479004 SLC26A2P50443 739 aa23.18■■□□□ 1.3
TRIM8-203ENST00000479004 HTRA4P83105 476 aaPredicted RBP23.18■■□□□ 1.3
TRIM8-203ENST00000479004 SETQ01105 290 aaPredicted RBP23.18■■□□□ 1.3
TRIM8-203ENST00000479004 TRIM22Q8IYM9 498 aa23.18■■□□□ 1.3
TRIM8-203ENST00000479004 ZBTB10Q96DT7 871 aa23.18■■□□□ 1.3
TRIM8-203ENST00000479004 IFIH1Q9BYX4 1025 aaKnown RBP23.18■■□□□ 1.3
TRIM8-203ENST00000479004 PDRG1Q9NUG6 133 aa23.18■■□□□ 1.3
TRIM8-203ENST00000479004 INSL6Q9Y581 213 aa23.18■■□□□ 1.3
TRIM8-203ENST00000479004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.17■■□□□ 1.3
TRIM8-203ENST00000479004 LINC01553A4QN01 128 aa23.17■■□□□ 1.3
TRIM8-203ENST00000479004 GTPBP6O43824 516 aaPredicted RBP23.17■■□□□ 1.3
TRIM8-203ENST00000479004 RPLP2P05387 115 aaKnown RBP23.17■■□□□ 1.3
TRIM8-203ENST00000479004 SSRP1Q08945 709 aaKnown RBP23.17■■□□□ 1.3
TRIM8-203ENST00000479004 TOP1MTQ969P6 601 aa23.17■■□□□ 1.3
TRIM8-203ENST00000479004 ZNF577Q9BSK1 485 aa23.17■■□□□ 1.3
TRIM8-203ENST00000479004 TBC1D22BQ9NU19 505 aa23.17■■□□□ 1.3
TRIM8-203ENST00000479004 PCDHA2Q9Y5H9 948 aa23.17■■□□□ 1.3
TRIM8-203ENST00000479004 CDY2AQ9Y6F7 541 aa23.17■■□□□ 1.3
TRIM8-203ENST00000479004 POTEB3A0JP26 581 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 EDIL3O43854 480 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 GHRP10912 638 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 NLRP5P59047 1200 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 ERVK-21P61565 698 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 GRB10Q13322 594 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 LPIN1Q14693 890 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 POTEBQ6S5H4 581 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 MICALL1Q8N3F8 863 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 UIMC1Q96RL1 719 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 C22orf23Q9BZE7 217 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 THEGQ9P2T0 379 aa23.16■■□□□ 1.3
TRIM8-203ENST00000479004 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
TRIM8-203ENST00000479004 CPLX1O14810 134 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms