RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 TCTN1Q2MV58 587 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 JAKMIP3Q5VZ66 844 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.95□□□□□ -0.826e-8■□□□□ 10.7
XRCC6-208ENST00000478914 NIPA1Q7RTP0 329 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 REXO1Q8N1G1 1221 aaKnown RBP9.95□□□□□ -0.82
XRCC6-208ENST00000478914 CCDC148Q8NFR7 591 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 TGS1Q96RS0 853 aaKnown RBP9.95□□□□□ -0.82
XRCC6-208ENST00000478914 IFIH1Q9BYX4 1025 aaKnown RBP9.95□□□□□ -0.82
XRCC6-208ENST00000478914 PRDM6Q9NQX0 595 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 NID2Q14112 1375 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 PRRC2BQ5JSZ5 2229 aaKnown RBP9.95□□□□□ -0.82
XRCC6-208ENST00000478914 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 EYSQ5T1H1 3165 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 VCANP13611 3396 aa9.95□□□□□ -0.82
XRCC6-208ENST00000478914 LCHNA4D1U4 455 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 DDX39AO00148 427 aaKnown RBP9.94□□□□□ -0.82
XRCC6-208ENST00000478914 BACH1O14867 736 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 ARHGEF15O94989 841 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 UPP2O95045 317 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 ARP10275 920 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 POU3F3P20264 500 aaPredicted RBP9.94□□□□□ -0.82
XRCC6-208ENST00000478914 STAT5BP51692 787 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 AAK1Q2M2I8 961 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 FAM26DQ5JW98 314 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 FAM160B1Q5W0V3 765 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 RUFY4Q6ZNE9 571 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 RPAINQ86UA6 219 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 TRIM22Q8IYM9 498 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 CYP2W1Q8TAV3 490 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 YME1L1Q96TA2 773 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 SLC26A6Q9BXS9 759 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
XRCC6-208ENST00000478914 ZMYND12Q9H0C1 365 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 AGO4Q9HCK5 861 aaKnown RBP9.94□□□□□ -0.82
XRCC6-208ENST00000478914 MTUS1Q9ULD2 1270 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 CYP46A1Q9Y6A2 500 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 MTCH2Q9Y6C9 303 aa9.94□□□□□ -0.82
XRCC6-208ENST00000478914 POTEB3A0JP26 581 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 MBLAC1A4D2B0 266 aaPredicted RBP9.93□□□□□ -0.82
XRCC6-208ENST00000478914 LINC01553A4QN01 128 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 EPOPA6NHQ4 379 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 MEIS1O00470 390 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 CPLX1O14810 134 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 CYP3A4P08684 503 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 GHRP10912 638 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 INSRRP14616 1297 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 SLC26A2P50443 739 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 ERVK-21P61565 698 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 CCT2P78371 535 aaKnown RBP9.93□□□□□ -0.82
XRCC6-208ENST00000478914 SETQ01105 290 aaPredicted RBP9.93□□□□□ -0.82
XRCC6-208ENST00000478914 GRB10Q13322 594 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 IER5Q5VY09 327 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 MIS18BP1Q6P0N0 1132 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 CPLX2Q6PUV4 134 aaKnown RBP9.93□□□□□ -0.82
XRCC6-208ENST00000478914 POTEBQ6S5H4 581 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 PLPPR4Q7Z2D5 763 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 GDPD5Q8WTR4 605 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 DNAJB3Q8WWF6 145 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 PHKBQ93100 1093 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 SAMD11Q96NU1 681 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 ASB2Q96Q27 587 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 AGXT2Q9BYV1 514 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 FAM49AQ9H0Q0 323 aaPredicted RBP9.93□□□□□ -0.82
XRCC6-208ENST00000478914 LMCD1Q9NZU5 365 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 CDY2AQ9Y6F7 541 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 TTC28Q96AY4 2481 aa9.93□□□□□ -0.82
XRCC6-208ENST00000478914 TTC3P53804 2025 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 IPO5O00410 1097 aaKnown RBP9.92□□□□□ -0.82
XRCC6-208ENST00000478914 HBP1O60381 514 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 CHRNA1P02708 482 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 IFNAR1P17181 557 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 PDIA3P30101 505 aaKnown RBP9.92□□□□□ -0.82
XRCC6-208ENST00000478914 NLRP5P59047 1200 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 MRPS6P82932 125 aaKnown RBP9.92□□□□□ -0.82
XRCC6-208ENST00000478914 HTRA4P83105 476 aaPredicted RBP9.92□□□□□ -0.82
XRCC6-208ENST00000478914 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
XRCC6-208ENST00000478914 ITGB3BPQ13352 177 aaPredicted RBP9.92□□□□□ -0.82
XRCC6-208ENST00000478914 PLCB4Q15147 1175 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 PKN1Q16512 942 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 MARCH8Q5T0T0 291 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 PDXDC2PQ6P474 469 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 CKAP2LQ8IYA6 745 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 PCYT2Q99447 389 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 ZNF577Q9BSK1 485 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 ZSWIM6Q9HCJ5 1215 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 ZNF302Q9NR11 478 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 TBC1D22BQ9NU19 505 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 COG5Q9UP83 839 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 COL4A6Q14031 1691 aa9.92□□□□□ -0.82
XRCC6-208ENST00000478914 KIAA1671Q9BY89 1806 aa9.91□□□□□ -0.82
XRCC6-208ENST00000478914 COL1A2P08123 1366 aa9.91□□□□□ -0.82
XRCC6-208ENST00000478914 IGLV3-22A0A075B6J6 115 aa9.91□□□□□ -0.82
XRCC6-208ENST00000478914 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms