RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 AAASQ9NRG9 546 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 MYH6P13533 1939 aa14.38□□□□□ -0.11
HDAC8-217ENST00000478743 B4DLN1 442 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 ZZEF1O43149 2961 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 DCNP07585 359 aaKnown RBP14.37□□□□□ -0.11
HDAC8-217ENST00000478743 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
HDAC8-217ENST00000478743 ARHGAP4P98171 946 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 CTDSPL2Q05D32 466 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 PPARAQ07869 468 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 CLASRPQ8N2M8 674 aaKnown RBP14.37□□□□□ -0.11
HDAC8-217ENST00000478743 RASGRP4Q8TDF6 673 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 NSUN6Q8TEA1 469 aaKnown RBP14.37□□□□□ -0.11
HDAC8-217ENST00000478743 ADAM7Q9H2U9 754 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 ZNF287Q9HBT7 754 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 TMEM260Q9NX78 707 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 CDV3Q9UKY7 258 aaKnown RBP14.37□□□□□ -0.11
HDAC8-217ENST00000478743 DUSP12Q9UNI6 340 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 CACNA1IQ9P0X4 2223 aa14.37□□□□□ -0.11
HDAC8-217ENST00000478743 TSPY2A6NKD2 308 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 APPP05067 770 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 NR3C2P08235 984 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 UBE3AQ05086 875 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 RARS2Q5T160 578 aaKnown RBP14.36□□□□□ -0.11
HDAC8-217ENST00000478743 MAML2Q8IZL2 1156 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-217ENST00000478743 COLGALT1Q8NBJ5 622 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 TCF25Q9BQ70 676 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 PARD6AQ9NPB6 346 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 DLGAP2Q9P1A6 1054 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 FBXL21Q9UKT6 434 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 HCFC2Q9Y5Z7 792 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
HDAC8-217ENST00000478743 CFHP08603 1231 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 SRGAP2BP0DMP2 458 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 PDHBP11177 359 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 HOXB8P17481 243 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-217ENST00000478743 TGM1P22735 817 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 PPM1JQ5JR12 505 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 TSHZ1Q6ZSZ6 1077 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 THNSL1Q8IYQ7 743 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 APPBP2Q92624 585 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 SEC62Q99442 399 aaKnown RBP14.35□□□□□ -0.11
HDAC8-217ENST00000478743 TMEM47Q9BQJ4 181 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 NCDNQ9UBB6 729 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 KAT6AQ92794 2004 aa14.35□□□□□ -0.11
HDAC8-217ENST00000478743 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
HDAC8-217ENST00000478743 FOXP2O15409 715 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 LRRN2O75325 713 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 EIF3JO75822 258 aaKnown RBP14.34□□□□□ -0.11
HDAC8-217ENST00000478743 EOMESO95936 686 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 GLULP15104 373 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 PBX3P40426 434 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 TDGQ13569 410 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 VARS2Q5ST30 1063 aaKnown RBP14.34□□□□□ -0.11
HDAC8-217ENST00000478743 SPOUT1Q5T280 376 aaKnown RBP14.34□□□□□ -0.11
HDAC8-217ENST00000478743 ARHGEF16Q5VV41 709 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 ZSCAN25Q6NSZ9 544 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 ZC3H14Q6PJT7 736 aaKnown RBP14.34□□□□□ -0.11
HDAC8-217ENST00000478743 RGS22Q8NE09 1264 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 NECTIN4Q96NY8 510 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 IWS1Q96ST2 819 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 ENTPD7Q9NQZ7 604 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 CA14Q9ULX7 337 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
HDAC8-217ENST00000478743 FSD2A1L4K1 749 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 STK25O00506 426 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 OPLAHO14841 1288 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 GOLGA8HP0CJ92 632 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 MYCLP12524 364 aaPredicted RBP14.33□□□□□ -0.12
HDAC8-217ENST00000478743 SCG2P13521 617 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 ZNF543Q08ER8 600 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 TPRNQ4KMQ1 711 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 KIAA1841Q6NSI8 718 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 CES5AQ6NT32 575 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 CASP10Q92851 521 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 KIF1BPQ96EK5 621 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 RTKNQ9BST9 563 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 TMX1Q9H3N1 280 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 CWH43Q9H720 699 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 TBC1D17Q9HA65 648 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 CYP26B1Q9NR63 512 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 DBR1Q9UK59 544 aaKnown RBP14.33□□□□□ -0.12
HDAC8-217ENST00000478743 MIA3Q5JRA6 1907 aa14.33□□□□□ -0.12
HDAC8-217ENST00000478743 TBKBP1A7MCY6 615 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 MGEA5O60502 916 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 MTHFRP42898 656 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 ITIH3Q06033 890 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 FAM102BQ5T8I3 360 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 DNAJB3Q8WWF6 145 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
HDAC8-217ENST00000478743 PDCD2LQ9BRP1 358 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 KCNK12Q9HB15 430 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
HDAC8-217ENST00000478743 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
HDAC8-217ENST00000478743 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
HDAC8-217ENST00000478743 CLASP2O75122 1294 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms