RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 EIF2AK2P19525 551 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 ZNF543Q08ER8 600 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 PAN2Q504Q3 1202 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 FBXO47Q5MNV8 452 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 ARHGEF16Q5VV41 709 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 KIAA0319Q5VV43 1072 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 KCNV1Q6PIU1 500 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 NPAS4Q8IUM7 802 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 ITPRIPQ8IWB1 547 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 KBTBD3Q8NAB2 608 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 SUMF1Q8NBK3 374 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 NACAP1Q9BZK3 213 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 AGO3Q9H9G7 860 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 PXMP2Q9NR77 195 aa8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-205ENST00000477888 USP24Q9UPU5 2620 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 HIDE1A8MVS5 230 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 STK25O00506 426 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 RANBP6O60518 1105 aaKnown RBP8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 RAB11FIP3O75154 756 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 FGRP09769 529 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 SNHG28P0DPA3 235 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 SDHBP21912 280 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 UBA1P22314 1058 aaKnown RBP8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 GATMP50440 423 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 ITIH3Q06033 890 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 CES5AQ6NT32 575 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 LLGL2Q6P1M3 1020 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 TAF2Q6P1X5 1199 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 RUFY4Q6ZNE9 571 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 MCF2L2Q86YR7 1114 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 SIRT2Q8IXJ6 389 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 LMBR1Q8WVP7 490 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 HINFPQ9BQA5 517 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 NAPBQ9H115 298 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 RNF39Q9H2S5 420 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 MLXIPQ9HAP2 919 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 ERVK-5Q9HDB9 667 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 USTQ9Y2C2 406 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 PCDHB12Q9Y5F1 795 aa8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 MAP1BP46821 2468 aaKnown RBP8.57□□□□□ -1.04
SPTLC1-205ENST00000477888 ABCB11O95342 1321 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 NRCAMQ92823 1304 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 NLRC5Q86WI3 1866 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 FOXP2O15409 715 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 ORC4O43929 436 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 ZFYP08048 801 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 ADRB1P08588 477 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 STAG3L1P0CL83 205 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 HSPD1P10809 573 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 ARHGAP4P98171 946 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 SIX5Q8N196 739 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 CASP10Q92851 521 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 GPKOWQ92917 476 aaPredicted RBP eCLIP8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 COL26A1Q96A83 441 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 PDCD2LQ9BRP1 358 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 FTHL17Q9BXU8 183 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 UBA5Q9GZZ9 404 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 CPVLQ9H3G5 476 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 TCP11L1Q9NUJ3 509 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 TMEM260Q9NX78 707 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 LZTS1Q9Y250 596 aa8.56□□□□□ -1.04
SPTLC1-205ENST00000477888 MBLAC1A4D2B0 266 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 WEE2P0C1S8 567 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 SP9P0CG40 484 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 SCG2P13521 617 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 CD52P31358 61 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 MTHFRP42898 656 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 HSD17B4P51659 736 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 PLCB3Q01970 1234 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 GHRHRQ02643 423 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 APOBRQ0VD83 1088 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 TDGQ13569 410 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 PLPP4Q5VZY2 271 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 ZC3H14Q6PJT7 736 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 FTSJ3Q8IY81 847 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 THNSL1Q8IYQ7 743 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 TDRD5Q8NAT2 981 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 RIN2Q8WYP3 895 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 MRPS27Q92552 414 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 GPR20Q99678 358 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 TCF25Q9BQ70 676 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 NGRNQ9NPE2 291 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 ECHDC1Q9NTX5 307 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 RYDENQ9NUL5 291 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 TYW1Q9NV66 732 aaKnown RBP8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 ANAPC4Q9UJX5 808 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 DUSP12Q9UNI6 340 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 HCFC2Q9Y5Z7 792 aa8.55□□□□□ -1.04
SPTLC1-205ENST00000477888 SQORQ9Y6N5 450 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms