RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 UTP14CQ5TAP6 766 aaKnown RBP22.42■■□□□ 1.18
ACTB-210ENST00000477812 SWSAP1Q6NVH7 229 aa22.42■■□□□ 1.18
ACTB-210ENST00000477812 PLPPR4Q7Z2D5 763 aa22.42■■□□□ 1.18
ACTB-210ENST00000477812 KRI1Q8N9T8 703 aaKnown RBP22.42■■□□□ 1.18
ACTB-210ENST00000477812 CLIC6Q96NY7 704 aa22.42■■□□□ 1.18
ACTB-210ENST00000477812 MTG1Q9BT17 334 aaPredicted RBP22.42■■□□□ 1.18
ACTB-210ENST00000477812 SAMM50Q9Y512 469 aa22.42■■□□□ 1.18
ACTB-210ENST00000477812 GRIN2DO15399 1336 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 A0A1W2PQ45 241 aaPredicted RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 A0A1W2PQY0 241 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 ZNF862O60290 1169 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 SPATA31C1P0DKV0 1188 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 NCLP19338 710 aaKnown RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 ATP4AP20648 1035 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 LONP1P36776 959 aaKnown RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 AXDND1Q5T1B0 1012 aaPredicted RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 AK8Q96MA6 479 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 EIF2AK1Q9BQI3 630 aaKnown RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 MMTAG2Q9BU76 263 aaKnown RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 RAB34Q9BZG1 259 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 SCAND2PQ9GZW5 306 aaPredicted RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 SMARCAD1Q9H4L7 1026 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 ZNF302Q9NR11 478 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 RGL1Q9NZL6 768 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 WRAP73Q9P2S5 460 aaPredicted RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 GABBR1Q9UBS5 961 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 LRWD1Q9UFC0 647 aa22.41■■□□□ 1.18
ACTB-210ENST00000477812 MKI67P46013 3256 aaKnown RBP22.41■■□□□ 1.18
ACTB-210ENST00000477812 H3BRB1 525 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 BACH1O14867 736 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 CABYRO75952 493 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 STBD1O95210 358 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 STAT5BP51692 787 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 NEK9Q8TD19 979 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 CSRNP2Q9H175 543 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 TUT1Q9H6E5 874 aaKnown RBP22.4■■□□□ 1.18
ACTB-210ENST00000477812 AZI2Q9H6S1 392 aa22.4■■□□□ 1.18
ACTB-210ENST00000477812 MED24O75448 989 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 SLITRK3O94933 977 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 P4HBP07237 508 aaKnown RBP22.39■■□□□ 1.17
ACTB-210ENST00000477812 CDC25AP30304 524 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 PSEN2P49810 448 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 SLC26A2P50443 739 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 PSMC6P62333 389 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 MFSD10Q14728 455 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 FAM160B1Q5W0V3 765 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 CLEC17AQ6ZS10 378 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 BANK1Q8NDB2 785 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 GLG1Q92896 1179 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 DYDC2Q96IM9 177 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 SPATA32Q96LK8 384 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 LXNQ9BS40 222 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 POLR3CQ9BUI4 534 aaPredicted RBP22.39■■□□□ 1.17
ACTB-210ENST00000477812 GDPD2Q9HCC8 539 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 ERAP1Q9NZ08 941 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 PCDHA7Q9UN72 937 aa22.39■■□□□ 1.17
ACTB-210ENST00000477812 DNAH12Q6ZR08 3092 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 RPA1P27694 616 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 QARSP47897 775 aaKnown RBP22.38■■□□□ 1.17
ACTB-210ENST00000477812 SOX10P56693 466 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 PSMC5P62195 406 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 CYP4A11Q02928 519 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 USP49Q70CQ1 688 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 CATSPER3Q86XQ3 398 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 ZNF579Q8NAF0 562 aaKnown RBP22.38■■□□□ 1.17
ACTB-210ENST00000477812 ATP6V0A1Q93050 837 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 PAWRQ96IZ0 340 aaKnown RBP22.38■■□□□ 1.17
ACTB-210ENST00000477812 GLT1D1Q96MS3 346 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 KATNAL1Q9BW62 490 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 RNPEPQ9H4A4 650 aa22.38■■□□□ 1.17
ACTB-210ENST00000477812 ZNF215Q9UL58 517 aaPredicted RBP22.38■■□□□ 1.17
ACTB-210ENST00000477812 CCDC85CA6NKD9 419 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 CUTAO60888 179 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 LYPLA2O95372 231 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 MARK3P27448 753 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 HOXC8P31273 242 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 PRKCEQ02156 737 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 CTTNQ14247 550 aaKnown RBP22.37■■□□□ 1.17
ACTB-210ENST00000477812 PLCB4Q15147 1175 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 ECM1Q16610 540 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 KIAA0753Q2KHM9 967 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 HAUS3Q68CZ6 603 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 SLC43A3Q8NBI5 491 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 ERMNQ8TAM6 284 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 SNX29Q8TEQ0 813 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 ATP8B4Q8TF62 1192 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 TUFT1Q9NNX1 390 aa22.37■■□□□ 1.17
ACTB-210ENST00000477812 MYH9P35579 1960 aaKnown RBP22.36■■□□□ 1.17
ACTB-210ENST00000477812 ME1P48163 572 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 SNX17Q15036 470 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 NBPF20Q3BBV1 942 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 SPECC1Q5M775 1068 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 HYIQ5T013 277 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 SHC4Q6S5L8 630 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 SESTD1Q86VW0 696 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 C4orf19Q8IY42 314 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 EPSTI1Q96J88 318 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 CCSER1Q9C0I3 900 aa22.36■■□□□ 1.17
ACTB-210ENST00000477812 C11orf49Q9H6J7 331 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms