RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 IGLV3-22A0A075B6J6 115 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 CA3P07451 260 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 MYOGP15173 224 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 HOXC8P31273 242 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
PDE6D-204ENST00000477748 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
PDE6D-204ENST00000477748 HIC1Q14526 733 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
PDE6D-204ENST00000477748 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 CNKSR3Q6P9H4 555 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 SERINC5Q86VE9 423 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 HERC6Q8IVU3 1022 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 DAGLBQ8NCG7 672 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 WASF1Q92558 559 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 SYMPKQ92797 1274 aaKnown RBP16.05■□□□□ 0.16
PDE6D-204ENST00000477748 GLG1Q92896 1179 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 RNPEPQ9H4A4 650 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 SMARCAD1Q9H4L7 1026 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 KCNJ14Q9UNX9 436 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 NCOR1O75376 2440 aa16.05■□□□□ 0.16
PDE6D-204ENST00000477748 TET1Q8NFU7 2136 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 DDX39AO00148 427 aaKnown RBP16.04■□□□□ 0.16
PDE6D-204ENST00000477748 GNAT1P11488 350 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 CIITAP33076 1130 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 ACTR2P61160 394 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 ADGRE1Q14246 886 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 PRR16Q569H4 304 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 ZNF577Q9BSK1 485 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 AZI2Q9H6S1 392 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 ERAP1Q9NZ08 941 aa16.04■□□□□ 0.16
PDE6D-204ENST00000477748 ABHD14A-ACY1A0A1B0GW23 586 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 M0R2N6 131 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 IPO5O00410 1097 aaKnown RBP16.03■□□□□ 0.16
PDE6D-204ENST00000477748 NBNO60934 754 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 CAND2O75155 1236 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 IGFBP4P22692 258 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 MARK3P27448 753 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 USP11P51784 963 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 WDR5P61964 334 aaKnown RBP16.03■□□□□ 0.16
PDE6D-204ENST00000477748 GPNMBQ14956 572 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 NPY5RQ15761 445 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 TRAF7Q6Q0C0 670 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 KIF2CQ99661 725 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 PHF20Q9BVI0 1012 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 SETD4Q9NVD3 440 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 LIMCH1Q9UPQ0 1083 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 GBF1Q92538 1859 aa16.03■□□□□ 0.16
PDE6D-204ENST00000477748 TREHO43280 583 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 LGR5O75473 907 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 FDPSP14324 419 aaKnown RBP16.02■□□□□ 0.16
PDE6D-204ENST00000477748 RBM25P49756 843 aaKnown RBP16.02■□□□□ 0.16
PDE6D-204ENST00000477748 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.16
PDE6D-204ENST00000477748 ZNF618Q5T7W0 954 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
PDE6D-204ENST00000477748 WNT8BQ93098 351 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 PCYT2Q99447 389 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.16
PDE6D-204ENST00000477748 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 TBC1D22BQ9NU19 505 aa16.02■□□□□ 0.16
PDE6D-204ENST00000477748 XIRP2A4UGR9 3374 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 NRCAMQ92823 1304 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 CCDC194A0A1B0GVG4 234 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
PDE6D-204ENST00000477748 EDIL3O43854 480 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 TLL1O43897 1013 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 ATG7O95352 703 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 CCNE2O96020 404 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 THPOP40225 353 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 STAT5BP51692 787 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 PPFIA1Q13136 1202 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 IKBKEQ14164 716 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 TJAP1Q5JTD0 557 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 ATXN2LQ8WWM7 1075 aaKnown RBP16.01■□□□□ 0.15
PDE6D-204ENST00000477748 THEGQ9P2T0 379 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 RAPGEFL1Q9UHV5 662 aa16.01■□□□□ 0.15
PDE6D-204ENST00000477748 MYH9P35579 1960 aaKnown RBP16■□□□□ 0.15
PDE6D-204ENST00000477748 RSPH10B2B2RC85 870 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 BACH1O14867 736 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 GTPBP6O43824 516 aaPredicted RBP16■□□□□ 0.15
PDE6D-204ENST00000477748 JAK2O60674 1132 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 RSPH10BP0C881 870 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 POU3F3P20264 500 aaPredicted RBP16■□□□□ 0.15
PDE6D-204ENST00000477748 ST3GAL1Q11201 340 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 MBTPS1Q14703 1052 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 INF2Q27J81 1249 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 FAM160B1Q5W0V3 765 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 MIS18BP1Q6P0N0 1132 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 PLPPR4Q7Z2D5 763 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 CCDC83Q8IWF9 413 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 PPM1EQ8WY54 764 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
PDE6D-204ENST00000477748 LENG9Q96B70 501 aa16■□□□□ 0.15
PDE6D-204ENST00000477748 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms