RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 HOMER1Q86YM7 354 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 WWC2-AS2Q96NR7 200 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 EPB41L1Q9H4G0 881 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 CLDND1Q9NY35 253 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 MYOTQ9UBF9 498 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 WASF3Q9UPY6 502 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 NPFFR2Q9Y5X5 522 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 CCDC163A0A0D9SF12 145 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 ENPP3O14638 875 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 PPP1R12AO14974 1030 aaPredicted RBP3.79□□□□□ -1.8
CACUL1-202ENST00000477583 MAFKO60675 156 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 MSCO60682 206 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 CDC45O75419 566 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 DGKIO75912 1065 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 ASMTLO95671 621 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 STYK1Q6J9G0 422 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 NUDT10Q8NFP7 164 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 Q8TCH9 128 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 PHOSPHO1Q8TCT1 267 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.79□□□□□ -1.8
CACUL1-202ENST00000477583 DCAF4Q8WV16 495 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 APPBP2Q92624 585 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 NUDT11Q96G61 164 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 PHF20Q9BVI0 1012 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 ZNF341Q9BYN7 854 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 NCOA5Q9HCD5 579 aaKnown RBP3.79□□□□□ -1.8
CACUL1-202ENST00000477583 RBPJLQ9UBG7 517 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 ING1Q9UK53 422 aaPredicted RBP3.79□□□□□ -1.8
CACUL1-202ENST00000477583 ADAM29Q9UKF5 820 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 TESMINQ9Y4I5 508 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 TRAF6Q9Y4K3 522 aa3.79□□□□□ -1.8
CACUL1-202ENST00000477583 ASXL2Q76L83 1435 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 KRIT1O00522 736 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 RAPGEF3O95398 923 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 CNOT4O95628 575 aaKnown RBP3.78□□□□□ -1.8
CACUL1-202ENST00000477583 COL6A1P12109 1028 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 TKFCQ3LXA3 575 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 HS1BP3Q53T59 392 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 PHF19Q5T6S3 580 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 VASNQ6EMK4 673 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 C16orf86Q6ZW13 317 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 SLC7A14Q8TBB6 771 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 PTPRN2Q92932 1015 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 SMOC1Q9H4F8 434 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 DLL4Q9NR61 685 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 GPR27Q9NS67 375 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 ASH2LQ9UBL3 628 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 NDOR1Q9UHB4 597 aa3.78□□□□□ -1.8
CACUL1-202ENST00000477583 PLD2O14939 933 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 KLHL18O94889 574 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 GPR85P60893 370 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 GABREP78334 506 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 SMAD2Q15796 467 aaKnown RBP3.77□□□□□ -1.81
CACUL1-202ENST00000477583 C21orf62-AS1Q17RA5 79 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 CYP4F22Q6NT55 531 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 RSPO2Q6UXX9 243 aaPredicted RBP3.77□□□□□ -1.81
CACUL1-202ENST00000477583 MAMDC2Q7Z304 686 aaPredicted RBP3.77□□□□□ -1.81
CACUL1-202ENST00000477583 TRIM48Q8IWZ4 208 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 IFNL2Q8IZJ0 200 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 DTX3Q8N9I9 347 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 TTLL11Q8NHH1 800 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 CLUHP3Q96NS8 147 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 GNRHR2Q96P88 292 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 MRPL4Q9BYD3 311 aaKnown RBP3.77□□□□□ -1.81
CACUL1-202ENST00000477583 SEC61A2Q9H9S3 476 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 SLC52A2Q9HAB3 445 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 HSPBP1Q9NZL4 362 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 CD2APQ9Y5K6 639 aa3.77□□□□□ -1.81
CACUL1-202ENST00000477583 CADPSQ9ULU8 1353 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.76□□□□□ -1.81
CACUL1-202ENST00000477583 FBXO21O94952 628 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 CHGBP05060 677 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 HSD3B2P26439 372 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 GRIN1Q05586 938 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 PABPC4Q13310 644 aaKnown RBP eCLIP3.76□□□□□ -1.81
CACUL1-202ENST00000477583 PRKD1Q15139 912 aaPredicted RBP3.76□□□□□ -1.81
CACUL1-202ENST00000477583 TCEA2Q15560 299 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 PLEKHG4Q58EX7 1191 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 TRIM61Q5EBN2 209 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 TCTN3Q6NUS6 607 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 LBX2Q6XYB7 198 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 Q6ZUG5 572 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 GPR155Q7Z3F1 870 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 KIAA0907Q7Z7F0 614 aaPredicted RBP3.76□□□□□ -1.81
CACUL1-202ENST00000477583 PROSER1Q86XN7 944 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 IFNL3Q8IZI9 196 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 SYNPOQ8N3V7 929 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 GIMAP8Q8ND71 665 aaPredicted RBP3.76□□□□□ -1.81
CACUL1-202ENST00000477583 GSTCDQ8NEC7 633 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 SCLYQ96I15 445 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 LRRC37BQ96QE4 947 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 LMF1Q96S06 567 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 ZFYVE21Q9BQ24 234 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 SLC6A20Q9NP91 592 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 PPARGC1AQ9UBK2 798 aaKnown RBP3.76□□□□□ -1.81
CACUL1-202ENST00000477583 SFMBT1Q9UHJ3 866 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 PCDHA9Q9Y5H5 950 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 SLC4A7Q9Y6M7 1214 aa3.76□□□□□ -1.81
CACUL1-202ENST00000477583 NPIPB8E9PQR5 432 aa3.75□□□□□ -1.81
CACUL1-202ENST00000477583 AQP7O14520 342 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms