RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 MBTPS1Q14703 1052 aa20.5■□□□□ 0.87
ABCB1-204ENST00000476862 ERICH6BQ5W0A0 696 aa20.5■□□□□ 0.87
ABCB1-204ENST00000476862 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
ABCB1-204ENST00000476862 IFNAR1P17181 557 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 SLC26A2P50443 739 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 NLRP5P59047 1200 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 ADAM17P78536 824 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 SETQ01105 290 aaPredicted RBP20.49■□□□□ 0.87
ABCB1-204ENST00000476862 PLPPR4Q7Z2D5 763 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 TMCO2Q7Z6W1 182 aaPredicted RBP20.49■□□□□ 0.87
ABCB1-204ENST00000476862 USP38Q8NB14 1042 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 COL25A1Q9BXS0 654 aaPredicted RBP20.49■□□□□ 0.87
ABCB1-204ENST00000476862 IFIH1Q9BYX4 1025 aaKnown RBP20.49■□□□□ 0.87
ABCB1-204ENST00000476862 TM6SF1Q9BZW5 370 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 THEGQ9P2T0 379 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 MICAL3Q7RTP6 2002 aa20.49■□□□□ 0.87
ABCB1-204ENST00000476862 NID2Q14112 1375 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 RFXAPO00287 272 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 EIF5BO60841 1220 aaKnown RBP20.48■□□□□ 0.87
ABCB1-204ENST00000476862 CYP3A4P08684 503 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 INSRRP14616 1297 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 FAM26DQ5JW98 314 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 IER5Q5VY09 327 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 MIS18BP1Q6P0N0 1132 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.48■□□□□ 0.87
ABCB1-204ENST00000476862 RPAINQ86UA6 219 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 DNAJB3Q8WWF6 145 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 TGS1Q96RS0 853 aaKnown RBP20.48■□□□□ 0.87
ABCB1-204ENST00000476862 ZNF577Q9BSK1 485 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 TBC1D22BQ9NU19 505 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 PDRG1Q9NUG6 133 aa20.48■□□□□ 0.87
ABCB1-204ENST00000476862 PTPRSQ13332 1948 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 IPO5O00410 1097 aaKnown RBP20.47■□□□□ 0.87
ABCB1-204ENST00000476862 PPFIA3O75145 1194 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 UPP2O95045 317 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 PKN1Q16512 942 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 TCTN1Q2MV58 587 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 TJAP1Q5JTD0 557 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 CKAP2LQ8IYA6 745 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 ATXN2LQ8WWM7 1075 aaKnown RBP20.47■□□□□ 0.87
ABCB1-204ENST00000476862 ZNF274Q96GC6 653 aaPredicted RBP20.47■□□□□ 0.87
ABCB1-204ENST00000476862 YME1L1Q96TA2 773 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 C22orf23Q9BZE7 217 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
ABCB1-204ENST00000476862 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
ABCB1-204ENST00000476862 CDH23Q9H251 3354 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 POTEB3A0JP26 581 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 GHRP10912 638 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 EVCP57679 992 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 ITGB3BPQ13352 177 aaPredicted RBP20.46■□□□□ 0.87
ABCB1-204ENST00000476862 POTEBQ6S5H4 581 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 RUFY4Q6ZNE9 571 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
ABCB1-204ENST00000476862 FAM49AQ9H0Q0 323 aaPredicted RBP20.46■□□□□ 0.87
ABCB1-204ENST00000476862 ZNF302Q9NR11 478 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 VPS54Q9P1Q0 977 aa20.46■□□□□ 0.87
ABCB1-204ENST00000476862 MYH9P35579 1960 aaKnown RBP20.46■□□□□ 0.87
ABCB1-204ENST00000476862 LCHNA4D1U4 455 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 FAM86B1E9PN63 330 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 HBP1O60381 514 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 FAM86B2P0C5J1 330 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
ABCB1-204ENST00000476862 STK3Q13188 491 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 TOB2Q14106 344 aaPredicted RBP20.45■□□□□ 0.86
ABCB1-204ENST00000476862 PLCB4Q15147 1175 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 NTRK3Q16288 839 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 PRR16Q569H4 304 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 PDXDC2PQ6P474 469 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 PCYT2Q99447 389 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 SAMM50Q9Y512 469 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 CDY2AQ9Y6F7 541 aa20.45■□□□□ 0.86
ABCB1-204ENST00000476862 MBLAC1A4D2B0 266 aaPredicted RBP20.44■□□□□ 0.86
ABCB1-204ENST00000476862 CDKL5O76039 1030 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 ATG7O95352 703 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 DEXIO95424 95 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 CHRNA1P02708 482 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
ABCB1-204ENST00000476862 POU3F3P20264 500 aaPredicted RBP20.44■□□□□ 0.86
ABCB1-204ENST00000476862 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
ABCB1-204ENST00000476862 AAK1Q2M2I8 961 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 PRDM6Q9NQX0 595 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 PCDHA2Q9Y5H9 948 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 MTCH2Q9Y6C9 303 aa20.44■□□□□ 0.86
ABCB1-204ENST00000476862 LINC01553A4QN01 128 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 PSAPP07602 524 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 XBP1P17861 261 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 ERVK-21P61565 698 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 KRT76Q01546 638 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 GRB10Q13322 594 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 MARCH8Q5T0T0 291 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 ZNF746Q6NUN9 644 aaPredicted RBP20.43■□□□□ 0.86
ABCB1-204ENST00000476862 SWSAP1Q6NVH7 229 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 ABHD15Q6UXT9 468 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 NME8Q8N427 588 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 RASGRP4Q8TDF6 673 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 TOP1MTQ969P6 601 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 SAMD11Q96NU1 681 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 UIMC1Q96RL1 719 aa20.43■□□□□ 0.86
ABCB1-204ENST00000476862 TRPV2Q9Y5S1 764 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms