RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 CDCA5Q96FF9 252 aa8.71□□□□□ -1.02
RBM39-230ENST00000476806 DHTKD1Q96HY7 919 aaPredicted RBP8.71□□□□□ -1.02
RBM39-230ENST00000476806 CCDC43Q96MW1 224 aaKnown RBP8.71□□□□□ -1.02
RBM39-230ENST00000476806 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
RBM39-230ENST00000476806 TSG101Q99816 390 aa8.71□□□□□ -1.02
RBM39-230ENST00000476806 MAGEC2Q9UBF1 373 aaPredicted RBP8.71□□□□□ -1.02
RBM39-230ENST00000476806 RWDD2AQ9UIY3 292 aa8.71□□□□□ -1.02
RBM39-230ENST00000476806 RPTORQ8N122 1335 aa8.71□□□□□ -1.02
RBM39-230ENST00000476806 SYNRGQ9UMZ2 1314 aa8.71□□□□□ -1.02
RBM39-230ENST00000476806 MYH7BA7E2Y1 1941 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SHTN1A0MZ66 631 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 IRF6O14896 467 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 CCP110O43303 1012 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 TDP2O95551 362 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 ADCY5O95622 1261 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SERPINC1P01008 464 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 CETPP11597 493 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 GAP43P17677 238 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 PLCG1P19174 1290 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 STAT3P40763 770 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 GCLCP48506 637 aaPredicted RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 GTF2A2P52657 109 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 HIRAP54198 1017 aaPredicted RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 ASIC1P78348 528 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 LRRC63Q05C16 580 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 PNOCQ13519 176 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 TRIM14Q14142 442 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 KARSQ15046 597 aaKnown RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 IQCB1Q15051 598 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 TMEM119Q4V9L6 283 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 ARHGEF16Q5VV41 709 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SPATA1Q5VX52 437 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SNRNP48Q6IEG0 339 aaKnown RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 UNC13DQ70J99 1090 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 RASGRP2Q7LDG7 609 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 RIOX2Q8IUF8 465 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 DRC7Q8IY82 874 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SMAP1Q8IYB5 467 aaPredicted RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 EXOC8Q8IYI6 725 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 AOPEPQ8N6M6 819 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 CCDC150Q8NCX0 1101 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 CCDC112Q8NEF3 446 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SHCBP1Q8NEM2 672 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 PXYLP1Q8TE99 480 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 RAD54LQ92698 747 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 ZKSCAN4Q969J2 545 aaPredicted RBP8.7□□□□□ -1.02
RBM39-230ENST00000476806 MXRA8Q9BRK3 442 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 ZNF577Q9BSK1 485 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 TRIM9Q9C026 710 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 TMEM60Q9H2L4 133 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 RNF146Q9NTX7 359 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 TMEM260Q9NX78 707 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 MAN1B1Q9UKM7 699 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SNCAIPQ9Y6H5 919 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 UBE4BO95155 1302 aa8.7□□□□□ -1.02
RBM39-230ENST00000476806 SSC5DA1L4H1 1573 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 H0YCG3 227 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 IPO5O00410 1097 aaKnown RBP8.69□□□□□ -1.02
RBM39-230ENST00000476806 MEIS1O00470 390 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 SLC37A4O43826 429 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 TBCAO75347 108 aaKnown RBP8.69□□□□□ -1.02
RBM39-230ENST00000476806 GNA14O95837 355 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 KRT18P05783 430 aaKnown RBP8.69□□□□□ -1.02
RBM39-230ENST00000476806 HOXC6P09630 235 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 TGFB3P10600 412 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 AFMP43652 599 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 JAG1P78504 1218 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 IRF5Q13568 498 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 MTMR1Q13613 665 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 SUZ12Q15022 739 aaKnown RBP8.69□□□□□ -1.02
RBM39-230ENST00000476806 EPHA7Q15375 998 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 SPECC1Q5M775 1068 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.69□□□□□ -1.02
RBM39-230ENST00000476806 LUZP1Q86V48 1076 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 ZSCAN30Q86W11 494 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 CPXCR1Q8N123 301 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 ATP6V0A1Q93050 837 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 SLC10A4Q96EP9 437 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 NACC1Q96RE7 527 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 RMDN3Q96TC7 470 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 MROH8Q9H579 483 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 JADE2Q9NQC1 790 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 SLC5A4Q9NY91 659 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 ODF2LQ9ULJ1 636 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 COL4A3BPQ9Y5P4 624 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 ZNF536O15090 1300 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 NFASCO94856 1347 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 PHLPP2Q6ZVD8 1323 aa8.69□□□□□ -1.02
RBM39-230ENST00000476806 PARP14Q460N5 1801 aa8.68□□□□□ -1.02
RBM39-230ENST00000476806 WDR64B1ANS9 1081 aa8.68□□□□□ -1.02
RBM39-230ENST00000476806 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
RBM39-230ENST00000476806 EEF1GP26641 437 aaKnown RBP8.68□□□□□ -1.02
RBM39-230ENST00000476806 RPS6P62753 249 aaKnown RBP8.68□□□□□ -1.02
RBM39-230ENST00000476806 GRIN1Q05586 938 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms