RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 TRPC6Q9Y210 931 aa24.32■■□□□ 1.48
LIMK1-204ENST00000476792 ADGRE1Q14246 886 aa24.31■■□□□ 1.48
LIMK1-204ENST00000476792 NIPA1Q7RTP0 329 aa24.31■■□□□ 1.48
LIMK1-204ENST00000476792 CRYGNQ8WXF5 182 aa24.31■■□□□ 1.48
LIMK1-204ENST00000476792 TUBE1Q9UJT0 475 aa24.31■■□□□ 1.48
LIMK1-204ENST00000476792 IGLV3-22A0A075B6J6 115 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 CAND2O75155 1236 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 ARHGEF15O94989 841 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 CCNE2O96020 404 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 INSRRP14616 1297 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 STAT5BP51692 787 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 PRR16Q569H4 304 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 CPLX2Q6PUV4 134 aaKnown RBP24.3■■□□□ 1.48
LIMK1-204ENST00000476792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.3■■□□□ 1.48
LIMK1-204ENST00000476792 SEPT8Q92599 483 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 ZNF577Q9BSK1 485 aa24.3■■□□□ 1.48
LIMK1-204ENST00000476792 RFXAPO00287 272 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 IPO5O00410 1097 aaKnown RBP24.29■■□□□ 1.48
LIMK1-204ENST00000476792 BACH1O14867 736 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 DTNBO60941 627 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 EFCAB14O75071 495 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 PLCB4Q15147 1175 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 CCDC85BQ15834 202 aaPredicted RBP24.29■■□□□ 1.48
LIMK1-204ENST00000476792 PLEKHG4Q58EX7 1191 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 TAF2Q6P1X5 1199 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 USP38Q8NB14 1042 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 TRAPPC12Q8WVT3 735 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 DNAJB3Q8WWF6 145 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 AIFM3Q96NN9 605 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 SH3GLB2Q9NR46 395 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 PTPRSQ13332 1948 aa24.29■■□□□ 1.48
LIMK1-204ENST00000476792 LCHNA4D1U4 455 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 DLL1O00548 723 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 DEXIO95424 95 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 TAP1Q03518 808 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 MARCH8Q5T0T0 291 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 RSPH3Q86UC2 560 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 ARNTL2Q8WYA1 636 aa24.28■■□□□ 1.48
LIMK1-204ENST00000476792 FAM49AQ9H0Q0 323 aaPredicted RBP24.28■■□□□ 1.48
LIMK1-204ENST00000476792 RRN3P2A6NIE6 340 aa24.27■■□□□ 1.48
LIMK1-204ENST00000476792 DHX15O43143 795 aaKnown RBP24.27■■□□□ 1.48
LIMK1-204ENST00000476792 CHRNA1P02708 482 aa24.27■■□□□ 1.48
LIMK1-204ENST00000476792 FAM26DQ5JW98 314 aa24.27■■□□□ 1.48
LIMK1-204ENST00000476792 PLPPR4Q7Z2D5 763 aa24.27■■□□□ 1.48
LIMK1-204ENST00000476792 MYOCDQ8IZQ8 938 aa24.27■■□□□ 1.48
LIMK1-204ENST00000476792 SLKQ9H2G2 1235 aaPredicted RBP24.27■■□□□ 1.48
LIMK1-204ENST00000476792 TPCN1Q9ULQ1 816 aa24.27■■□□□ 1.48
LIMK1-204ENST00000476792 POTEB3A0JP26 581 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 MBLAC1A4D2B0 266 aaPredicted RBP24.26■■□□□ 1.47
LIMK1-204ENST00000476792 ATG7O95352 703 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 GJB5O95377 273 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 AMHP03971 560 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 SETQ01105 290 aaPredicted RBP24.26■■□□□ 1.47
LIMK1-204ENST00000476792 SCRN1Q12765 414 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 FAM160B1Q5W0V3 765 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 MIS18BP1Q6P0N0 1132 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 POTEBQ6S5H4 581 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 ABHD15Q6UXT9 468 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 SPRED2Q7Z698 418 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 MICALL1Q8N3F8 863 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 PCDHA4Q9UN74 947 aa24.26■■□□□ 1.47
LIMK1-204ENST00000476792 EPOPA6NHQ4 379 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 GHRP10912 638 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 ANAPC15P60006 121 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 SWSAP1Q6NVH7 229 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 TRMT1LQ7Z2T5 733 aaKnown RBP24.25■■□□□ 1.47
LIMK1-204ENST00000476792 CCDC60Q8IWA6 550 aaPredicted RBP24.25■■□□□ 1.47
LIMK1-204ENST00000476792 TNPO1Q92973 898 aaKnown RBP24.25■■□□□ 1.47
LIMK1-204ENST00000476792 ZNF302Q9NR11 478 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 TBC1D22BQ9NU19 505 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 TCEAL9Q9UHQ7 104 aa24.25■■□□□ 1.47
LIMK1-204ENST00000476792 CIITAP33076 1130 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 AK2P54819 239 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 TMEM62Q0P6H9 643 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 PDXDC2PQ6P474 469 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 BLIDQ8IZY5 108 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 TBCKQ8TEA7 893 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 RAD9AQ99638 391 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 IFIH1Q9BYX4 1025 aaKnown RBP24.24■■□□□ 1.47
LIMK1-204ENST00000476792 PRDM6Q9NQX0 595 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 CDY2AQ9Y6F7 541 aa24.24■■□□□ 1.47
LIMK1-204ENST00000476792 MICAL3Q7RTP6 2002 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 IGKV6D-21A0A0A0MT36 114 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 EDIL3O43854 480 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 CDKL5O76039 1030 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 UPP2O95045 317 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 RPAINQ86UA6 219 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 CKAP2LQ8IYA6 745 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 LENG9Q96B70 501 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 MTUS1Q9ULD2 1270 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 KCNJ14Q9UNX9 436 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 SAMM50Q9Y512 469 aa24.23■■□□□ 1.47
LIMK1-204ENST00000476792 PFKFB2O60825 505 aa24.22■■□□□ 1.47
LIMK1-204ENST00000476792 SLC26A2P50443 739 aa24.22■■□□□ 1.47
LIMK1-204ENST00000476792 MRPS6P82932 125 aaKnown RBP24.22■■□□□ 1.47
LIMK1-204ENST00000476792 MGAT3Q09327 533 aa24.22■■□□□ 1.47
LIMK1-204ENST00000476792 MKRN4PQ13434 485 aaPredicted RBP24.22■■□□□ 1.47
LIMK1-204ENST00000476792 LPIN1Q14693 890 aa24.22■■□□□ 1.47
LIMK1-204ENST00000476792 ZNF746Q6NUN9 644 aaPredicted RBP24.22■■□□□ 1.47
LIMK1-204ENST00000476792 ATP8B4Q8TF62 1192 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms