RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 AZI2Q9H6S1 392 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 PRDM6Q9NQX0 595 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 SCN5AQ14524 2016 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 IGKV6D-21A0A0A0MT36 114 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 RRN3P2A6NIE6 340 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 FAM86B1E9PN63 330 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 DHX15O43143 795 aaKnown RBP12.3□□□□□ -0.44
SEC13-214ENST00000476597 AMHP03971 560 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 FAM86B2P0C5J1 330 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 INSRRP14616 1297 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 STAT5BP51692 787 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 CCT2P78371 535 aaKnown RBP12.3□□□□□ -0.44
SEC13-214ENST00000476597 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 ABHD15Q6UXT9 468 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 SPRED2Q7Z698 418 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 PLA2G4DQ86XP0 818 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 ARNTL2Q8WYA1 636 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 SEPT8Q92599 483 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
SEC13-214ENST00000476597 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 MYH7BA7E2Y1 1941 aa12.3□□□□□ -0.44
SEC13-214ENST00000476597 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.29□□□□□ -0.44
SEC13-214ENST00000476597 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 CCNE2O96020 404 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
SEC13-214ENST00000476597 MGAT3Q09327 533 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 PLCB4Q15147 1175 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 REXO1Q8N1G1 1221 aaKnown RBP12.29□□□□□ -0.44
SEC13-214ENST00000476597 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 DNAJB3Q8WWF6 145 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 APBB2Q92870 758 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 TOP1MTQ969P6 601 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
SEC13-214ENST00000476597 SLC26A6Q9BXS9 759 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 NCOA5Q9HCD5 579 aaKnown RBP12.29□□□□□ -0.44
SEC13-214ENST00000476597 TUBE1Q9UJT0 475 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
SEC13-214ENST00000476597 TRIP12Q14669 1992 aaPredicted RBP12.29□□□□□ -0.44
SEC13-214ENST00000476597 REV3LO60673 3130 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
SEC13-214ENST00000476597 EDIL3O43854 480 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 LPXNO60711 386 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 RPLP2P05387 115 aaKnown RBP12.28□□□□□ -0.44
SEC13-214ENST00000476597 CIITAP33076 1130 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 SLC26A2P50443 739 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 ERVK-21P61565 698 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 IGBP1P78318 339 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 GRB10Q13322 594 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 FAM117BQ6P1L5 589 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 ATXN2LQ8WWM7 1075 aaKnown RBP12.28□□□□□ -0.44
SEC13-214ENST00000476597 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
SEC13-214ENST00000476597 TGS1Q96RS0 853 aaKnown RBP12.28□□□□□ -0.44
SEC13-214ENST00000476597 SH3GLB2Q9NR46 395 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 TBC1D22BQ9NU19 505 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 LMCD1Q9NZU5 365 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 VPS54Q9P1Q0 977 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 MUC3AQ02505 3323 aa12.28□□□□□ -0.44
SEC13-214ENST00000476597 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.44
SEC13-214ENST00000476597 POTEB3A0JP26 581 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 LINC01553A4QN01 128 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 IPO5O00410 1097 aaKnown RBP12.27□□□□□ -0.45
SEC13-214ENST00000476597 LPIN1Q14693 890 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 FBXO47Q5MNV8 452 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 POTEBQ6S5H4 581 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 CCDC148Q8NFR7 591 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
SEC13-214ENST00000476597 RASGRP4Q8TDF6 673 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 ZBTB10Q96DT7 871 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
SEC13-214ENST00000476597 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 IFIH1Q9BYX4 1025 aaKnown RBP12.27□□□□□ -0.45
SEC13-214ENST00000476597 UPF3BQ9BZI7 483 aaKnown RBP12.27□□□□□ -0.45
SEC13-214ENST00000476597 SUGCTQ9HAC7 445 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 PDRG1Q9NUG6 133 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 THEGQ9P2T0 379 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 PCDHA2Q9Y5H9 948 aa12.27□□□□□ -0.45
SEC13-214ENST00000476597 DDX39AO00148 427 aaKnown RBP12.26□□□□□ -0.45
SEC13-214ENST00000476597 ENPP3O14638 875 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 BACH1O14867 736 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 HBP1O60381 514 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 GHRP10912 638 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 ATP4AP20648 1035 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 USP11P51784 963 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 MRPS6P82932 125 aaKnown RBP12.26□□□□□ -0.45
SEC13-214ENST00000476597 SETQ01105 290 aaPredicted RBP12.26□□□□□ -0.45
SEC13-214ENST00000476597 SSRP1Q08945 709 aaKnown RBP12.26□□□□□ -0.45
SEC13-214ENST00000476597 PRR16Q569H4 304 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 IER5Q5VY09 327 aa12.26□□□□□ -0.45
SEC13-214ENST00000476597 FAM160B1Q5W0V3 765 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms