RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TAF6LQ9Y6J9 622 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 WASHC2AQ641Q2 1341 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 FRMPD2Q68DX3 1309 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 TCRBV5S4A2TA0A5A2 114 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 KRIT1O00522 736 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 MAN2B1O00754 1011 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 TCEA3O75764 348 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 FGAP02671 866 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 ZBTB48P10074 688 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 TACR1P25103 407 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 GRIK1P39086 918 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 ERVK-21P61565 698 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 MSMPQ1L6U9 139 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 FIGNQ5HY92 759 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 RALGPS1Q5JS13 557 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 GALNT18Q6P9A2 607 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 CLEC4GQ6UXB4 293 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 RIOX2Q8IUF8 465 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 CBARPQ8N350 705 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 NME8Q8N427 588 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 ENAHQ8N8S7 591 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 ANKS4BQ8N8V4 417 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 ANKRD42Q8N9B4 389 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 BCL7CQ8WUZ0 217 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 ELAC2Q9BQ52 826 aaKnown RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 SLC6A20Q9NP91 592 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 TOMM22Q9NS69 142 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 SAP30BPQ9UHR5 308 aaKnown RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 TMEM59LQ9UK28 342 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 FBXO9Q9UK97 447 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 DSEQ9UL01 958 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-207ENST00000476169 SRPK3Q9UPE1 567 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 SLC5A6Q9Y289 635 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 GIT1Q9Y2X7 761 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 SPO11Q9Y5K1 396 aa5.23□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQJ5 194 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 SCDO00767 359 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 APAF1O14727 1248 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 IL33O95760 270 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 CD8BP10966 210 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 LSP1P33241 339 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 CYP2C19P33261 490 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 RECQLP46063 649 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-207ENST00000476169 TRAPPC10P48553 1259 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 KIF11P52732 1056 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 CHRNEQ04844 493 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 GRM3Q14832 879 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 SAFBQ15424 915 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13D-207ENST00000476169 TERF2Q15554 542 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 FSTL4Q6MZW2 842 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 NOSTRINQ8IVI9 506 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 NLGN4XQ8N0W4 816 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 NUP43Q8NFH3 380 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 UHMK1Q8TAS1 419 aaKnown RBP5.22□□□□□ -1.57
VPS13D-207ENST00000476169 ASIC4Q96FT7 647 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 ELF4Q99607 663 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-207ENST00000476169 CD244Q9BZW8 370 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 PDLIM7Q9NR12 457 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 C14orf119Q9NWQ9 140 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 NUB1Q9Y5A7 615 aa5.22□□□□□ -1.57
VPS13D-207ENST00000476169 DVL2O14641 736 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 ERC2O15083 957 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 XPOTO43592 962 aaKnown RBP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 MAFKO60675 156 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 PROCP04070 461 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 NTRK1P04629 796 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 MYL3P08590 195 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 MSL3P1P0C860 447 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 PRKCAP17252 672 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 HK2P52789 917 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 PHC1P78364 1004 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 SMAD3P84022 425 aaKnown RBP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 MVKQ03426 396 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 PCBP2Q15366 365 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 SMAD2Q15796 467 aaKnown RBP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 CHRNA2Q15822 529 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 INAVAQ3KP66 663 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 FAM83BQ5T0W9 1011 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 STEAP3Q658P3 488 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 CPZQ66K79 652 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 INTS5Q6P9B9 1019 aaKnown RBP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 PGM2L1Q6PCE3 622 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 C1orf228Q6PIY5 440 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 CABP7Q86V35 215 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 SPPL2CQ8IUH8 684 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 CPXCR1Q8N123 301 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 CPA6Q8N4T0 437 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 OXR1Q8N573 874 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 ZNF610Q8N9Z0 462 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 SH3RF2Q8TEC5 729 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 PARD3BQ8TEW8 1205 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 TTC17Q96AE7 1141 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 TNIP3Q96KP6 325 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 STRBPQ96SI9 672 aaKnown RBP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 SENP7Q9BQF6 1050 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 SP110Q9HB58 689 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms