RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 FAM170BA6NMN3 283 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 BTBD19C9JJ37 291 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 RAB6AP20340 208 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 ARNTP27540 789 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 NTF4P34130 210 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 BTDP43251 543 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 ASPAP45381 313 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 CACNB3P54284 484 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 ERVK-24P63145 666 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 LACTBP83111 547 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 CYP27A1Q02318 531 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 G3BP1Q13283 466 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 PABPC4Q13310 644 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 ZC3H12AQ5D1E8 599 aaKnown RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 DYMQ7RTS9 669 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 PRRT2Q7Z6L0 340 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 VSIG10LQ86VR7 867 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 ERC1Q8IUD2 1116 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 FAM43AQ8N2R8 423 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 ZNF512BQ96KM6 892 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 TBC1D32Q96NH3 1257 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 PTPN18Q99952 460 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 OSBPL5Q9H0X9 879 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 DHX36Q9H2U1 1008 aaKnown RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 CHMP4BQ9H444 224 aaKnown RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 RWDD1Q9H446 243 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 RAD18Q9NS91 495 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 GPN3Q9UHW5 284 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 PARP14Q460N5 1801 aa5.08□□□□□ -1.6
VPS13D-206ENST00000476045 PLXNB2O15031 1838 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 GPR75-ASB3A0A0A6YYF3 556 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 PDHXO00330 501 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 DYNC1LI2O43237 492 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-206ENST00000476045 CTNND1O60716 968 aaKnown RBP5.07□□□□□ -1.6
VPS13D-206ENST00000476045 BAG3O95817 575 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 P4HBP07237 508 aaKnown RBP5.07□□□□□ -1.6
VPS13D-206ENST00000476045 LIG1P18858 919 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 BMP6P22004 513 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 ADORA1P30542 326 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 RING1Q06587 406 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 OS9Q13438 667 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-206ENST00000476045 FAM110CQ1W6H9 321 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 HSP90AB4PQ58FF6 505 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 OGFOD3Q6PK18 319 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 SPATA5Q8NB90 893 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 SSH3Q8TE77 659 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 FRMD6Q96NE9 622 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 EMILIN2Q9BXX0 1053 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 CEP44Q9C0F1 390 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 R3HDMLQ9H3Y0 253 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 C12orf49Q9H741 205 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 AS3MTQ9HBK9 375 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 USP40Q9NVE5 1235 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 CCDC39Q9UFE4 941 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 ABCF2Q9UG63 623 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 FZD1Q9UP38 647 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 PA2G4Q9UQ80 394 aaKnown RBP5.07□□□□□ -1.6
VPS13D-206ENST00000476045 LAMA3Q16787 3333 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 ALPK3Q96L96 1907 aa5.07□□□□□ -1.6
VPS13D-206ENST00000476045 MYPNQ86TC9 1320 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 BAZ2AQ9UIF9 1905 aaKnown RBP5.06□□□□□ -1.6
VPS13D-206ENST00000476045 HMMRO75330 724 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 WNT11O96014 354 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 HLA-DOAP06340 250 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 ASNSP08243 561 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 SLFN14P0C7P3 912 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 GCLCP48506 637 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-206ENST00000476045 RHBDL3P58872 404 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 UBXN2AP68543 259 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 MECOMQ03112 1051 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 TCP10Q12799 353 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 TFCP2Q12800 502 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 BECN1Q14457 450 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 TNNI3KQ59H18 835 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 CCDC158Q5M9N0 1113 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 TTC39AQ5SRH9 613 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 C17orf99Q6UX52 265 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 CBLL1Q75N03 491 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 ZNF765Q7L2R6 523 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 ITPRIPQ8IWB1 547 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 TEX11Q8IYF3 940 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 FBXL6Q8N531 539 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 RAET1EQ8TD07 263 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 SMCR8Q8TEV9 937 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-206ENST00000476045 ZKSCAN4Q969J2 545 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-206ENST00000476045 NSUN4Q96CB9 384 aaKnown RBP5.06□□□□□ -1.6
VPS13D-206ENST00000476045 SLKQ9H2G2 1235 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-206ENST00000476045 RAI14Q9P0K7 980 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 HMG20BQ9P0W2 317 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 LRP2BPQ9P2M1 347 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 FAM8A1Q9UBU6 413 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 SRRDQ9UH36 339 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 ADGRE2Q9UHX3 823 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 AGTPBP1Q9UPW5 1226 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 PTCH2Q9Y6C5 1203 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 FPGT-TNNI3KV9GXZ4 949 aa5.06□□□□□ -1.6
VPS13D-206ENST00000476045 GREB1LQ9C091 1923 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-206ENST00000476045 FLT1P17948 1338 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 MCAMP43121 646 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms