RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 ABCB11O95342 1321 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 H3BRB1 525 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 PER2O15055 1255 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 PPFIA4O75335 1185 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 EIF3JO75822 258 aaKnown RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 GGPS1O95749 300 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 LMNAP02545 664 aaKnown RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 LINC00271P0C7V0 271 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 TOP1P11387 765 aaKnown RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 IBSPP21815 317 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 RFX1P22670 979 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 DNAJB1P25685 340 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 TECP42680 631 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 ARHGAP4P98171 946 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 HIC1Q14526 733 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 RRP12Q5JTH9 1297 aaKnown RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 KCNV1Q6PIU1 500 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 RSPH3Q86UC2 560 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 CMTR2Q8IYT2 770 aaKnown RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 KBTBD3Q8NAB2 608 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 SPPL3Q8TCT6 385 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 SUSD6Q92537 303 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 TAAR1Q96RJ0 339 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 TUT1Q9H6E5 874 aaKnown RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 MLXIPQ9HAP2 919 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 IL17RBQ9NRM6 502 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 ZNF215Q9UL58 517 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-204ENST00000475403 PCDHGC5Q9Y5F6 944 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 KIAA1671Q9BY89 1806 aa7.86□□□□□ -1.15
LSAMP-204ENST00000475403 DHX16O60231 1041 aaKnown RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 DGKIO75912 1065 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 SEC24BO95487 1268 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 BRD1O95696 1058 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 LGALS2P05162 132 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 STAG3L1P0CL83 205 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 PDHBP11177 359 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 RLBP1P12271 317 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 MYCLP12524 364 aaPredicted RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 GABPB1Q06547 395 aaPredicted RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 CAMK1Q14012 370 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 ANGPT1Q15389 498 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 HSDL1Q3SXM5 330 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 CELF3Q5SZQ8 465 aaKnown RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 CES5AQ6NT32 575 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 LLGL2Q6P1M3 1020 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 SYTL5Q8TDW5 730 aaPredicted RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 TSPYL1Q9H0U9 437 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 RC3H2Q9HBD1 1191 aaKnown RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 AAASQ9NRG9 546 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 ECHDC1Q9NTX5 307 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 SETD4Q9NVD3 440 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 LRFN2Q9ULH4 789 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 PCDHB12Q9Y5F1 795 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 TPRP12270 2363 aaKnown RBP7.85□□□□□ -1.15
LSAMP-204ENST00000475403 DMXL1Q9Y485 3027 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 EPG5Q9HCE0 2579 aa7.85□□□□□ -1.15
LSAMP-204ENST00000475403 NCOR2Q9Y618 2525 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 STK25O00506 426 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 CFBP00751 764 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 NR3C2P08235 984 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 HSPD1P10809 573 aaKnown RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 CHRM1P11229 460 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 HOXD8P13378 290 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 CLCN5P51795 746 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 CDC37Q16543 378 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 DUSP6Q16828 381 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 ST3GAL2Q16842 350 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 MYSM1Q5VVJ2 828 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 PLPP4Q5VZY2 271 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 ANKRD54Q6NXT1 300 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 ZC3H14Q6PJT7 736 aaKnown RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 NPAS4Q8IUM7 802 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 THNSL1Q8IYQ7 743 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 TDRD5Q8NAT2 981 aaKnown RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 CYP2W1Q8TAV3 490 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 TNPO1Q92973 898 aaKnown RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 ZNF689Q96CS4 500 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 NECTIN4Q96NY8 510 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 TMEM47Q9BQJ4 181 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 C16orf70Q9BSU1 422 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 C22orf23Q9BZE7 217 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 OSBPL7Q9BZF2 842 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 LRRCC1Q9C099 1032 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 MAF1Q9H063 256 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 SEMA4AQ9H3S1 761 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 RNPEPQ9H4A4 650 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 ENTPD7Q9NQZ7 604 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 PXMP2Q9NR77 195 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 FBXL21Q9UKT6 434 aa7.84□□□□□ -1.15
LSAMP-204ENST00000475403 MRPL11Q9Y3B7 192 aaKnown RBP7.84□□□□□ -1.15
LSAMP-204ENST00000475403 EP300Q09472 2414 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-204ENST00000475403 PLXNA4Q9HCM2 1894 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 TTC3P53804 2025 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 KAT6AQ92794 2004 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 C2CD4DB7Z1M9 353 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 M0QZ92 97 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms