RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 ADGRD2Q7Z7M1 963 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 EFHBQ8N7U6 833 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 CLEC1BQ9P126 229 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
ITGB1-211ENST00000475184 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 MYO10Q9HD67 2058 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 LOC730098B7Z3J9 87 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 ST18O60284 1047 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-211ENST00000475184 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
ITGB1-211ENST00000475184 ZXDAP98168 799 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 COASYQ13057 564 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 GRIK4Q16099 956 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 PCNX4Q63HM2 1172 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 CMTR2Q8IYT2 770 aaKnown RBP18.34■□□□□ 0.53
ITGB1-211ENST00000475184 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 LINC01599Q8WXQ3 324 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 VPS13AQ96RL7 3174 aa18.34■□□□□ 0.53
ITGB1-211ENST00000475184 WDR87Q6ZQQ6 2873 aa18.33■□□□□ 0.53
ITGB1-211ENST00000475184 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-211ENST00000475184 HIP1O00291 1037 aa18.33■□□□□ 0.52
ITGB1-211ENST00000475184 NRIP1P48552 1158 aa18.33■□□□□ 0.52
ITGB1-211ENST00000475184 TCF15Q12870 199 aa18.33■□□□□ 0.52
ITGB1-211ENST00000475184 CBX2Q14781 532 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-211ENST00000475184 FBXL6Q8N531 539 aa18.33■□□□□ 0.52
ITGB1-211ENST00000475184 KLHL23Q8NBE8 558 aa18.33■□□□□ 0.52
ITGB1-211ENST00000475184 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-211ENST00000475184 DNAJB3Q8WWF6 145 aa18.33■□□□□ 0.52
ITGB1-211ENST00000475184 AGO3Q9H9G7 860 aaKnown RBP18.33■□□□□ 0.52
ITGB1-211ENST00000475184 USP15Q9Y4E8 981 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-211ENST00000475184 GLP2RO95838 553 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 MARK3P27448 753 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 CD52P31358 61 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 MRPS6P82932 125 aaKnown RBP18.32■□□□□ 0.52
ITGB1-211ENST00000475184 PAN2Q504Q3 1202 aaKnown RBP18.32■□□□□ 0.52
ITGB1-211ENST00000475184 XRRA1Q6P2D8 792 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 NPAS4Q8IUM7 802 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 CRIPAKQ8N1N5 446 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 ERAP1Q9NZ08 941 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
ITGB1-211ENST00000475184 EVPLQ92817 2033 aa18.32■□□□□ 0.52
ITGB1-211ENST00000475184 MARCH8Q5T0T0 291 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 RBM23Q86U06 439 aaKnown RBP18.31■□□□□ 0.52
ITGB1-211ENST00000475184 NLRX1Q86UT6 975 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 PLEKHM2Q8IWE5 1019 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 SMARCC2Q8TAQ2 1214 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 POF1BQ8WVV4 589 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 PLXNA3P51805 1871 aa18.31■□□□□ 0.52
ITGB1-211ENST00000475184 RPLP2P05387 115 aaKnown RBP18.3■□□□□ 0.52
ITGB1-211ENST00000475184 KCNA2P16389 499 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 SIGLEC14Q08ET2 396 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 TROAPQ12815 778 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 TRDNQ13061 729 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 RTN4RL1Q86UN2 441 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-211ENST00000475184 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 SEPT1Q8WYJ6 367 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 GLG1Q92896 1179 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 CUL5Q93034 780 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 PHF7Q9BWX1 381 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-211ENST00000475184 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-211ENST00000475184 SENP2Q9HC62 589 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 PCDHGC5Q9Y5F6 944 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 SQORQ9Y6N5 450 aa18.3■□□□□ 0.52
ITGB1-211ENST00000475184 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 PIK3CDO00329 1044 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 IFIT3O14879 490 aaKnown RBP18.29■□□□□ 0.52
ITGB1-211ENST00000475184 ATP9AO75110 1047 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 STAG3L1P0CL83 205 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 IGBP1P78318 339 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 IER5Q5VY09 327 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 B4GALNT3Q6L9W6 998 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 GPRASP2Q96D09 838 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 CDHR1Q96JP9 859 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 RPGRIP1Q96KN7 1286 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 SMARCAD1Q9H4L7 1026 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 TLE6Q9H808 572 aa18.29■□□□□ 0.52
ITGB1-211ENST00000475184 ERICH2A1L162 156 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 MEIS2O14770 477 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 GFRA3O60609 400 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 SCG2P13521 617 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 VCPP55072 806 aaKnown RBP18.28■□□□□ 0.52
ITGB1-211ENST00000475184 SMC5Q8IY18 1101 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 ZBTB10Q96DT7 871 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 FAM86C1Q9NVL1 165 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 PADI3Q9ULW8 664 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 TRPV2Q9Y5S1 764 aa18.28■□□□□ 0.52
ITGB1-211ENST00000475184 IGSF9BQ9UPX0 1349 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 RRN3P2A6NIE6 340 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 M0QZ92 97 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
ITGB1-211ENST00000475184 GATMP50440 423 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 TMEM62Q0P6H9 643 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 PAK2Q13177 524 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 WTAPQ15007 396 aa18.27■□□□□ 0.52
ITGB1-211ENST00000475184 CHD1LQ86WJ1 897 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms