RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
CLIP2-204ENST00000474962 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 DEXIO95424 95 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 LARGE1O95461 756 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 GNAT1P11488 350 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 XBP1P17861 261 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 TCF7P36402 384 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-204ENST00000474962 NAPAP54920 295 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 ADAM17P78536 824 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 NTRK3Q16288 839 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 SEPT1Q8WYJ6 367 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 TMX3Q96JJ7 454 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 RAD9AQ99638 391 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 MTCH2Q9Y6C9 303 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 DOCK5Q9H7D0 1870 aa13.5□□□□□ -0.25
CLIP2-204ENST00000474962 EMSYQ7Z589 1322 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 STXBP3O00186 592 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 ADAMTS3O15072 1205 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 GJB5O95377 273 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 CTSHP09668 335 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 ARP10275 920 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 SCG2P13521 617 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 MARK3P27448 753 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 PFKFB3Q16875 520 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-204ENST00000474962 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 TJAP1Q5JTD0 557 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 FAM184AQ8NB25 1140 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 LMBR1Q8WVP7 490 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 ATXN2LQ8WWM7 1075 aaKnown RBP13.49□□□□□ -0.25
CLIP2-204ENST00000474962 CDHR1Q96JP9 859 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 MXRA8Q9BRK3 442 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 LLPHQ9BRT6 129 aaKnown RBP13.49□□□□□ -0.25
CLIP2-204ENST00000474962 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
CLIP2-204ENST00000474962 KCNH7Q9NS40 1196 aa13.49□□□□□ -0.25
CLIP2-204ENST00000474962 ORC3Q9UBD5 711 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-204ENST00000474962 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-204ENST00000474962 NRCAMQ92823 1304 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 MAFGO15525 162 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 LPXNO60711 386 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 CD2BP2O95400 341 aaKnown RBP13.48□□□□□ -0.25
CLIP2-204ENST00000474962 CHRNA1P02708 482 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 HSP90AA1P07900 732 aaKnown RBP13.48□□□□□ -0.25
CLIP2-204ENST00000474962 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-204ENST00000474962 CCDC148Q8NFR7 591 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 SYMPKQ92797 1274 aaKnown RBP13.48□□□□□ -0.25
CLIP2-204ENST00000474962 GLG1Q92896 1179 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 ASB2Q96Q27 587 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 PCYT2Q99447 389 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 BARHL2Q9NY43 387 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-204ENST00000474962 BDP1A6H8Y1 2624 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
CLIP2-204ENST00000474962 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 K7ELQ4 463 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-204ENST00000474962 EFCAB14O75071 495 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 ADCY7P51828 1080 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
CLIP2-204ENST00000474962 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
CLIP2-204ENST00000474962 TFF2Q03403 129 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 GRB10Q13322 594 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 TRIM29Q14134 588 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 CEP55Q53EZ4 464 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 SEPT8Q92599 483 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 SNX21Q969T3 373 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 C6orf50Q9HD87 102 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 ERAP1Q9NZ08 941 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 THEGQ9P2T0 379 aa13.47□□□□□ -0.25
CLIP2-204ENST00000474962 STK36Q9NRP7 1315 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 MEIS1O00470 390 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 GTPBP6O43824 516 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 UPP2O95045 317 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 AMHP03971 560 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 GNA11P29992 359 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 NLRP5P59047 1200 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 IGBP1P78318 339 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 GRIK4Q16099 956 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 PKN1Q16512 942 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 FAM26DQ5JW98 314 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 JAKMIP3Q5VZ66 844 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms