RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 ATP2C1P98194 919 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-204ENST00000474644 FAM47CQ5HY64 1035 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 NCAPH2Q6IBW4 605 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 PLPPR4Q7Z2D5 763 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 ANKRD33Q7Z3H0 272 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 C7orf31Q8N865 590 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 FTOQ9C0B1 505 aaKnown RBP eCLIP17.73■□□□□ 0.43
COL1A1-204ENST00000474644 ERAP1Q9NZ08 941 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 GABBR1Q9UBS5 961 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 MROH7Q68CQ1 1323 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 POTEMA6NI47 508 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 DDIT3P35638 169 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 PRPHP41219 470 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 SLC26A2P50443 739 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 TLE2Q04725 743 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 PTPN11Q06124 597 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-204ENST00000474644 UGCGQ16739 394 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 PDXDC2PQ6P474 469 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 FAM126BQ8IXS8 530 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 HDAC6Q9UBN7 1215 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
COL1A1-204ENST00000474644 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-204ENST00000474644 BMP15O95972 392 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 SMIM10L2AP0DMW4 78 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 SMIM10L2BP0DMW5 78 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL1A1-204ENST00000474644 PLCB4Q15147 1175 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
COL1A1-204ENST00000474644 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 TOX2Q96NM4 488 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 USP28Q96RU2 1077 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
COL1A1-204ENST00000474644 GTF2IRD1Q9UHL9 959 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
COL1A1-204ENST00000474644 CLIC4Q9Y696 253 aa17.71■□□□□ 0.43
COL1A1-204ENST00000474644 EVI5O60447 810 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 B4GALT4O60513 344 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 ATP4AP20648 1035 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 HOXC8P31273 242 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 TECP42680 631 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 HIC1Q14526 733 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 EPHA7Q15375 998 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 IL17AQ16552 155 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 GDF6Q6KF10 455 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-204ENST00000474644 BANK1Q8NDB2 785 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 ATP8B4Q8TF62 1192 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 DPF3Q92784 378 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 ATP6V0A1Q93050 837 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 TRPV6Q9H1D0 765 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-204ENST00000474644 CEP131Q9UPN4 1083 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
COL1A1-204ENST00000474644 C17orf102A2RUQ5 167 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 TLR3O15455 904 aaKnown RBP17.69■□□□□ 0.42
COL1A1-204ENST00000474644 ZNF862O60290 1169 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 CD4P01730 458 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 PRKCEQ02156 737 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
COL1A1-204ENST00000474644 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 PTPAQ15257 358 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 ARL6IP4Q66PJ3 421 aaKnown RBP17.69■□□□□ 0.42
COL1A1-204ENST00000474644 DTHD1Q6ZMT9 781 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 IGSF22Q8N9C0 903 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 LMBR1Q8WVP7 490 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 PDLIM7Q9NR12 457 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 SETD4Q9NVD3 440 aa17.69■□□□□ 0.42
COL1A1-204ENST00000474644 MYH15Q9Y2K3 1946 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 OATP04181 439 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 P4HBP07237 508 aaKnown RBP17.68■□□□□ 0.42
COL1A1-204ENST00000474644 CLTBP09497 229 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 PSMC5P62195 406 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 CYP4A11Q02928 519 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 FAAP100Q0VG06 881 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 PTGISQ16647 500 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-204ENST00000474644 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-204ENST00000474644 CKAP2LQ8IYA6 745 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 NEK9Q8TD19 979 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 DYDC2Q96IM9 177 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 FAM167AQ96KS9 214 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 ZNF396Q96N95 335 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-204ENST00000474644 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
COL1A1-204ENST00000474644 LXNQ9BS40 222 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 RGL1Q9NZL6 768 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 WRAP73Q9P2S5 460 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-204ENST00000474644 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 NRCAMQ92823 1304 aa17.68■□□□□ 0.42
COL1A1-204ENST00000474644 VWA3AA6NCI4 1184 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 INSRRP14616 1297 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 QARSP47897 775 aaKnown RBP17.67■□□□□ 0.42
COL1A1-204ENST00000474644 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-204ENST00000474644 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-204ENST00000474644 GRIK4Q16099 956 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms