RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SASS6Q6UVJ0 657 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 CATSPER3Q86XQ3 398 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PPTC7Q8NI37 304 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 LARP4BQ92615 738 aaKnown RBP11.56□□□□□ -0.56
COL12A1-206ENST00000474564 EMID1Q96A84 441 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PLIN2Q99541 437 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 HSD17B14Q9BPX1 270 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PDGFCQ9NRA1 345 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 RMND1Q9NWS8 449 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 FLRT1Q9NZU1 646 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 GABBR1Q9UBS5 961 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 ARHGEF35A5YM69 484 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 GOLGA6L3A6NEY3 463 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 EML1O00423 815 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 SEPT4O43236 478 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 SLITRK3O94933 977 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 ATG7O95352 703 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 ZNF865P0CJ78 1059 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 SP2Q02086 613 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 SEMA3FQ13275 785 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 CTTNQ14247 550 aaKnown RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 XKR3Q5GH77 459 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 L1TD1Q5T7N2 865 aaKnown RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 UTP14CQ5TAP6 766 aaKnown RBP11.55□□□□□ -0.56
COL12A1-206ENST00000474564 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 USP49Q70CQ1 688 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 C4orf19Q8IY42 314 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 ENGASEQ8NFI3 743 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 TRIB2Q92519 343 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 LXNQ9BS40 222 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 ANKEF1Q9NU02 776 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 KCND2Q9NZV8 630 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 SERTAD1Q9UHV2 236 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 PPME1Q9Y570 386 aa11.55□□□□□ -0.56
COL12A1-206ENST00000474564 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 SORBS3O60504 671 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 MED24O75448 989 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 LYPLA2O95372 231 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 EYA4O95677 639 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 CCNE2O96020 404 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 ELNP15502 786 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 SMPD1P17405 629 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 AFMP43652 599 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 CACNB2Q08289 660 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 GRB10Q13322 594 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 SNW1Q13573 536 aaKnown RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 DHX8Q14562 1220 aaKnown RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 POSTNQ15063 836 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 CAMK4Q16566 473 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 ZSCAN23Q3MJ62 389 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 SLC9C1Q4G0N8 1177 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 TMEM119Q4V9L6 283 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 B3GNT9Q6UX72 402 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 PLPPR4Q7Z2D5 763 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 RAD54LQ92698 747 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 GPR20Q99678 358 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 JPH2Q9BR39 696 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 KATNAL1Q9BW62 490 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 KATNBL1Q9H079 304 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 ERAP1Q9NZ08 941 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
COL12A1-206ENST00000474564 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
COL12A1-206ENST00000474564 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-206ENST00000474564 SYCE3A1L190 88 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-206ENST00000474564 ARIH2O95376 493 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 PLA2G4BP0C869 781 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 CYBAP13498 195 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 YWHABP31946 246 aaKnown RBP11.53□□□□□ -0.56
COL12A1-206ENST00000474564 ARHGAP1Q07960 439 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 XKR9Q5GH70 373 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 RNF180Q86T96 592 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 CCDC65Q8IXS2 484 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 PCSK9Q8NBP7 692 aaKnown RBP11.53□□□□□ -0.56
COL12A1-206ENST00000474564 ARRDC4Q8NCT1 418 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 AFAP1L1Q8TED9 768 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 AFG1LQ8WV93 481 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-206ENST00000474564 PAGE5Q96GU1 130 aa11.53□□□□□ -0.56
COL12A1-206ENST00000474564 MMTAG2Q9BU76 263 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms