RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
CDPF1-205ENST00000474256 TUBE1Q9UJT0 475 aa18.01■□□□□ 0.47
CDPF1-205ENST00000474256 DOCK5Q9H7D0 1870 aa18.01■□□□□ 0.47
CDPF1-205ENST00000474256 RRN3P2A6NIE6 340 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 FAM86B1E9PN63 330 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 ADAMTS3O15072 1205 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 GTPBP6O43824 516 aaPredicted RBP18■□□□□ 0.47
CDPF1-205ENST00000474256 LPXNO60711 386 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 FAM86B2P0C5J1 330 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 INSRRP14616 1297 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
CDPF1-205ENST00000474256 HTRA4P83105 476 aaPredicted RBP18■□□□□ 0.47
CDPF1-205ENST00000474256 GRB10Q13322 594 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 MCTP2Q6DN12 878 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 RUFY3Q7L099 469 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 MYOCDQ8IZQ8 938 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 CCDC12Q8WUD4 166 aaPredicted RBP18■□□□□ 0.47
CDPF1-205ENST00000474256 APBB2Q92870 758 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 RNF26Q9BY78 433 aaPredicted RBP18■□□□□ 0.47
CDPF1-205ENST00000474256 C6orf50Q9HD87 102 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 INSL6Q9Y581 213 aa18■□□□□ 0.47
CDPF1-205ENST00000474256 MYO9BQ13459 2157 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 IGLV3-22A0A075B6J6 115 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 IGKV6D-21A0A0A0MT36 114 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
CDPF1-205ENST00000474256 LINC01553A4QN01 128 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 IFNAR1P17181 557 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 GNA11P29992 359 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 ZNF76P36508 570 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 STAT5BP51692 787 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 ERVK-21P61565 698 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 MGAT3Q09327 533 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 TOB2Q14106 344 aaPredicted RBP17.99■□□□□ 0.47
CDPF1-205ENST00000474256 PLCB4Q15147 1175 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 FAM117BQ6P1L5 589 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 RSPH3Q86UC2 560 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 PLA2G4DQ86XP0 818 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
CDPF1-205ENST00000474256 TOP1MTQ969P6 601 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
CDPF1-205ENST00000474256 PTPRSQ13332 1948 aa17.99■□□□□ 0.47
CDPF1-205ENST00000474256 DHX15O43143 795 aaKnown RBP17.98■□□□□ 0.47
CDPF1-205ENST00000474256 CCNE2O96020 404 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 NEFLP07196 543 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 AKAP17AQ02040 695 aaKnown RBP17.98■□□□□ 0.47
CDPF1-205ENST00000474256 KRT40Q6A162 431 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
CDPF1-205ENST00000474256 DNAJB3Q8WWF6 145 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 TNPO1Q92973 898 aaKnown RBP17.98■□□□□ 0.47
CDPF1-205ENST00000474256 ASB2Q96Q27 587 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 TGS1Q96RS0 853 aaKnown RBP17.98■□□□□ 0.47
CDPF1-205ENST00000474256 TM6SF1Q9BZW5 370 aa17.98■□□□□ 0.47
CDPF1-205ENST00000474256 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 RPLP2P05387 115 aaKnown RBP17.97■□□□□ 0.47
CDPF1-205ENST00000474256 SLC26A2P50443 739 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 IGBP1P78318 339 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
CDPF1-205ENST00000474256 MRPS5P82675 430 aaKnown RBP17.97■□□□□ 0.47
CDPF1-205ENST00000474256 LPIN1Q14693 890 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 ABHD15Q6UXT9 468 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 ZBTB10Q96DT7 871 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 SLC26A6Q9BXS9 759 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
CDPF1-205ENST00000474256 SUGCTQ9HAC7 445 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
CDPF1-205ENST00000474256 LMCD1Q9NZU5 365 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
CDPF1-205ENST00000474256 IPO5O00410 1097 aaKnown RBP17.96■□□□□ 0.47
CDPF1-205ENST00000474256 GHRP10912 638 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 CIITAP33076 1130 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 FBXO47Q5MNV8 452 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 CCDC148Q8NFR7 591 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 PCDHA2Q9Y5H9 948 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 CYP46A1Q9Y6A2 500 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 CDY2AQ9Y6F7 541 aa17.96■□□□□ 0.47
CDPF1-205ENST00000474256 TRANK1O15050 2925 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 POTEB3A0JP26 581 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 DDX39AO00148 427 aaKnown RBP17.95■□□□□ 0.46
CDPF1-205ENST00000474256 MRPS6P82932 125 aaKnown RBP17.95■□□□□ 0.46
CDPF1-205ENST00000474256 SETQ01105 290 aaPredicted RBP17.95■□□□□ 0.46
CDPF1-205ENST00000474256 POTEBQ6S5H4 581 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 CCDC60Q8IWA6 550 aaPredicted RBP17.95■□□□□ 0.46
CDPF1-205ENST00000474256 RASGRP4Q8TDF6 673 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 GDPD5Q8WTR4 605 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 ZNF274Q96GC6 653 aaPredicted RBP17.95■□□□□ 0.46
CDPF1-205ENST00000474256 ZNF577Q9BSK1 485 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 FAM49AQ9H0Q0 323 aaPredicted RBP17.95■□□□□ 0.46
CDPF1-205ENST00000474256 SH3GLB2Q9NR46 395 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 TBC1D22BQ9NU19 505 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 VPS54Q9P1Q0 977 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 MTUS1Q9ULD2 1270 aa17.95■□□□□ 0.46
CDPF1-205ENST00000474256 IER5Q5VY09 327 aa17.94■□□□□ 0.46
CDPF1-205ENST00000474256 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
CDPF1-205ENST00000474256 TRAPPC12Q8WVT3 735 aa17.94■□□□□ 0.46
CDPF1-205ENST00000474256 YME1L1Q96TA2 773 aa17.94■□□□□ 0.46
CDPF1-205ENST00000474256 C17orf80Q9BSJ5 609 aa17.94■□□□□ 0.46
CDPF1-205ENST00000474256 UPF3BQ9BZI7 483 aaKnown RBP17.94■□□□□ 0.46
CDPF1-205ENST00000474256 SQORQ9Y6N5 450 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms